NONHSAT094090

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT094090

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1834 nt

Genomic location

chr3-:194192715..194206447

Exon number

6

Exons

194192715..194192899,194195382..194195891,194197496..194198325,194202685..194202780,194203450..194203464,194206250..194206447

Genome context

Sequence
000001 AAAATGAATG GGTGTGGAGT CGTACACCTA GAAACAGACT TGTGTTCCTC TATACGATTC TAACTAAATG AGTAGAACAT 000080
000081 ACCTGGGTAT GTCATGGCTA CTTTAGATCT ATGAGGCAGG AAGTTAGAAT TTAAGGAATC TAAGAAATGC AGGGACTTGA 000160
000161 AAGATTATTG CAAAATAAAG CCTTTAAAAA GTATCGTTCT CCCAAAGTGT AGGCCATAAA ATGATTCTCT AGAGGGAACT 000240
000241 ATGCCAATAC CATATCTGTT AACATCTTAG ACCCACAGGG TCATATTGGA ACCTTTGCTA GAGTCTGAGG ATCCTGATTA 000320
000321 AGAGGAAGAG GAAGGGTTGA TCTGAAGAAC ATAGTGCTGT GGTGGAGGTT GTGTAGAGTT CCATGAGGTC ACTAAGGGAC 000400
000401 CTGGGAACAC AGGATATTGG GAGAGCTGGG AAAGGGGAAT AGGGATGAGA TGCGGGAGCA TGCCAAAGAC AAAATTACTT 000480
000481 TGTTGTCAAA TTTTGCCCAC AAAAAGAAGA GGGATTCCAC CCCTCCTTCA CCCAGTCTTG CCCTGTCTCC TTTATTCAGC 000560
000561 TGCACTGCTG GATGCTTGCC TGGTTCCCAG CCTTTAAGGT TTTTAGTCTA TAAGTTCAAC GTTGTTGGAA AAGTGCTCTG 000640
000641 ATACCTGCAG AGGTGGGAGA AAGGTGGGGG CAGTCCTCTG CTAGGAGATG GAAGGGACAA TCAAAGCTTA GTAGCTTGAG 000720
000721 CTGGTCCTGG AAGAGCAAGT AGGAGCTCTT TAGCCAGACT AAGAGAAGGG CATTCTTGGC AGAAGGAATA TTCTATATAA 000800
000801 AGAAGTGGAG TCAGGGAACA GTAGGGCTCT TTGAAGAACT ACAGATTGTG TTCTAAATGA ATGACATGTA AGGTTTGTAA 000880
000881 GGGGCGAGTG ATAACCACTG ATGAATGGCA GATGGTGTTG ACAACTAGGC GGGGCCAGAG TCTGTAGGAT CTTACATGTC 000960
000961 TTGCAATCAG TTTTGACTTT GACCTTGGAA CCCAGTTGAG GCTCCCTTCC GCCCCAGTTC CTCATGGCAG GGAAATACAT 001040
001041 CATGTTGTGC GTTGTAAGAC TTCAAAACTT TGCTAGTGAG AGGCCTGCTT AATATTATTT AATCTAGTTC AATTTAATTG 001120
001121 TTTTGAAAAA AAAAAAAAAG AAGACTTGGA GGTATAACCT CTGGAAAATT TTCTTCCACT CTTCTTTTTT TCTTCTCTAC 001200
001201 TCTTCCCTAT TCCTATATTA TTCCCTAGCA TCCCCTTTTT CTCATCCTAG CTTTTCCTCT CCACCGTGCT GCGCTATTTC 001280
001281 AGTATCTTTC TATGCAGAAC GTTACTTTTT GTTGTATTAT GCAACTACAG TGTAATCTTT TTGAATACTT TAATTAGTAA 001360
001361 TTTAAACTCA ACATAGTCTT AGCAACAGTG CACGTTACTT AGCTGGCATG ACCATAGTCT GAGCGGTGTG GCCAGTGTGA 001440
001441 AGCATGAGTG TGCAGTGAGC ACCGCATCAC AGCAGCCACT TGCCGGCAGC AGCTGTAAGG TTGTATCTAA GCAGTGTCTT 001520
001521 GATTTTAGCT ATGGTAAAAT GAGAATTCAT GAATGTTTAA ATTTCAGAGA CCATCTTTAA TTTGATGACT GAAATGTCAG 001600
001601 CAGTTATTTG AGATTTTTAT TAATAGCATT ACAGTTTCAA ATGAATAGTC AGAGTTAATG TCGTCATTGG GCACTGCGAA 001680
001681 AAGGAGACTG AAGAACTGAC AGCCATTCCT CAGATGGCGT CGAGGTGCAG GGTTGACTCT GGATGTTGTA ATCAGAAAGA 001760
001761 GTGTTGGTTG CCTGCAGCAA TCAGCTGGTT GCCTGCAGAA GTGAGCCTCT TCTGGTCAGG GGGCATACTT TTTT
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Predicted Small Protein

Name NONHSAT094090_smProtein_449:640
Length 64
Molecular weight 6942.14
Aromaticity 0.0793650793651
Instability index 56.5253968254
Isoelectric point 10.0303344727
Runs 8
Runs residual 0.0179786200194
Runs probability 0.032315403639
Amino acid sequence MREHAKDKITLLSNFAHKKKRDSTPPSPSLALSPLFSCTAGCLPGSQPLRFLVYKFNVVG
KVL
Secondary structure LLLHHHHHEEEEELHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEEE
EEL
PRMN -
PiMo -