NONHSAT094467
Revision as of 19:43, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...")
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT094467 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS),sense |
Length |
687 nt |
Genomic location |
chr3+:197680434..197682722 |
Exon number |
2 |
Exons |
197680434..197681018,197682621..197682722 |
Genome context |
|
Sequence |
000001 agtcatcccg tgatcacttc atggcatttc ccctcccttt ccagtctttg ttccatggtc acctcagtga gaccttcctt 000080
000081 ggctatttaa aatggcaggt aattcctcct ttctgtacac acaaatatcc tcacacttgt ccttttttgc tattttttca 000160 000161 atattgcctc tgttatcatc tgacctatgt attttcctta aacttacttg gttatcatgt gaaagatttt tgttttatag 000240 000241 ctgctgtatt ttacagaagg gcctggcata caatagttac tcgataagta tctgttgaat gaatgGTGTT CTAGGCAttt 000320 000321 aaagtttctc aggtgatgaa gtgggtaacc agggttgaga gccactCGTG TAGAGGTCAC CTTGAATTTG TATCCAACTA 000400 000401 TATCAGCTTG TATTCCTCTT CTTTCCCTTT TTAAAATCAG CAACACAGTC ACTCCTGGCG GCAAACCAAA CAAAACCAGA 000480 000481 GTCATCTGGG GAAAAGTAAC TCGGGCCCAT GGAAACAGTG GCATGGTTCG TGCCAAATTC CGAAGCAATC TTCCTGCTAA 000560 000561 GGCCATTGGA CACAGAATCC GAGTGATGCT GTACCCCTCA AGGATTTAAA CTAACGAAAA ATCAATAAAT AAATGTGGAT 000640 000641 TTGTGCTCTT GTATTTTTAA GTGGATTAAA AAACTTACTA CCTTAAA |
Predicted Small Protein
Name | NONHSAT094467_smProtein_20:286 |
Length | 89 |
Molecular weight | 10600.4153 |
Aromaticity | 0.238636363636 |
Instability index | 48.02625 |
Isoelectric point | 8.91534423828 |
Runs | 10 |
Runs residual | 0.0177272727273 |
Runs probability | 0.0296149090266 |
Amino acid sequence | MAFPLPFQSLFHGHLSETFLGYLKWQVIPPFCTHKYPHTCPFLLFFQYCLCYHLTYVFSL NLLGYHVKDFCFIAAVFYRRAWHTIVTR |
Secondary structure | LLLLLLLHHHHLLLHHHHHHHHHHHHEELLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHH HHHHHLHHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH HHHHLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | oooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTT TTTTiiiiTTTTTTTTTTTTTTTTTToo |