NONHSAT096924
Revision as of 19:52, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096924 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1089 nt |
Genomic location |
chr4-:76415808..76435017 |
Exon number |
7 |
Exons |
76415808..76415911,76416793..76416847,76416934..76416992,76417099..76417143,76419311..76419389,76434030..76434145,76434387..76435017 |
Genome context |
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Sequence |
000001 tcttacatgg tggtggcaat agaaaatgag gaagaagcaa aagtggaaac tcctgataaa cccatcagat ctcatgagat 000080
000081 tttattcatt atcacgagaa tggcacggga gagtctggcc cccatgattc agttacctcc ttctaagtcc ctcccacaac 000160 000161 acgtgggaat tctgggagat acatttcaag ttgagatttg ggtgggaaca cagccaaagc atatcaGGTG TTGTGGGATT 000240 000241 AGTGTTTCAA TCTAGGGATT TCCTTCATAA TTCTTTTGTT TTAAAGTTGT GTTCAACTTC ATACAGACGT AGTGATGTTG 000320 000321 AAGGGAAGAA TTAACATAAA ATATGCCAAG AAACTAGTGA AATGTTATGT TTAGGATCAG TTTAGCAACT GATCTATTGG 000400 000401 TTGTAATCTT TCAGTTCCAT CCAGGAGGAG GAGGAAGAAA TTTTCTTTTT GTATTGCACA CTTAGTTTCT TTTGCTTCTT 000480 000481 ACTATATCTC TTTTTTCTCC GTGGGTGTTA GGCACCTTGC TGTGACAAGC TTTATACTTG CCGCTTGTGT CATGATAACA 000560 000561 ATGAAGATCA TCAACTAGAT CGCTTTAAAG TGAAGGAAGT GCAGTGCATA AACTGTGAAA AAATTCAACA TGCCCAACAG 000640 000641 ACTTGTGAAG AATGTAGCAC ATTGTTTGGA GAATATTATT GCGATATATG CCATTTGTTT GACAAAGATA AGAAGCAGTA 000720 000721 TCACTGTGAA AACTGTGGAA TTTGTAGGAT TGGTCCAAAG GAAGATTTTT TCCATTGTTT GAAATGTAAC TTATGCCTAG 000800 000801 CTATGAATCT TCAAGGAAGA CACAAGTGTA TTGAAAATGT GTCCCGACAG AATTGTCCAA TATGTTTGGA GGACATTCAC 000880 000881 ACATCCCGTG TTGTTGCTCA TGTCTTGCCA TGTGGACATC TTTTACATAG AACGTGTTAT GAAGAAATGT TGAAAGAGTG 000960 000961 AGTGTTTGGG ATTTTAAAAA TAATTAGGCT ACAGATGTCC ATTATGTATG CACTCTGCTT TAGATATGAC CAGGTATTGG 001040 001041 AGACAGCTGG ATGATGAAGT AGCACAGACT CCTATGCCAT CAGAATATC |
Predicted Small Protein
Name | NONHSAT096924_smProtein_629:781 |
Length | 51 |
Molecular weight | 5643.8205 |
Aromaticity | 0.06 |
Instability index | 42.814 |
Isoelectric point | 9.89642333984 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0243000353295 |
Amino acid sequence | MPNRLVKNVAHCLENIIAIYAICLTKIRSSITVKTVEFVGLVQRKIFSIV |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHLLLLLEEEEEEEEEELLHHHEEEEL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii |