NONHSAT097678
Revision as of 19:55, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097678 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1116 nt |
Genomic location |
chr4-:106405925..106407102 |
Exon number |
2 |
Exons |
106405925..106406790,106406853..106407102 |
Genome context |
|
Sequence |
000001 ATAGTCTGAG AAGCTCTCAA CATACACGGG CTTGCCAGGA ACCATATCAA CAATGGCAGC ATCACCAGAC TTCAAGAATT 000080
000081 TAGGGCCATC TTCCAGCTTT TTACCAGAAT GGCGATCAGT CTTTTCCTTC AGCTCAGCAA ACTTGCATGC AATGTGAGCC 000160 000161 GTGTGGCAAT CCAATACAGG GGCATAGCCA GCACTTATTT GGCCTGGATG GTTCAGGATA ATCACCTGAG CAGTGAAGCC 000240 000241 AGCTGCTTCC ATTCTTGACA TTGAAGCCCA CATTGTCCCC AGGAAGAACT TCACTCAAAG CTTCATGGTG CATTTCAACA 000320 000321 GATTTTACTT CTGTTGCAAC GTTGACTGGA GCAAAGGTGA CCACCATACC AGGTTTGAGA ACACCAGTCT CCACTCAGCC 000400 000401 AACAGGAACA GTACCAATAC CACCAATTTT GTAGACATCC TGGAGAGGCA GGCACAAGGG CTTGTCAGTT GGACGAGTTG 000480 000481 GTGGTAGGAT GCAGTCAAGA GCCTCAAGCA GCGTGGTTCC ACTGGCATTG CCATCCTTAC GGGTGACTTT CCATCCCTTG 000560 000561 AACCAAGGCA TGTTAGCACT TGGCTCCAGC GTGTTGTCAC CATTCCAACC AGAAACTGGC ACAAATGCTA CTGTGTCGGT 000640 000641 GTTGTGGCCA ATTTTCTTAA TGTAAGTGCT GACTTCCTTA ACAATTTCCT CATATCTCTT ATGGCTGTAG GGTGGCTCAG 000720 000721 TGGAATCCAT TTTGTTAACA CCAACAATTA GTTGTTTCAC ACCCAGTGTG TAAGCCAGAA GGGCGTGCTC TCGGGTCTGC 000800 000801 CCATTCTTGG AGATACCAGC TTCAAATTCA CCAAAACCAG CAGCAACAAT CAAGACAGCA CAGTCAGCCT GAGATGTCCC 000880 000881 TGTAATCATG TTTTTGATGA GGTCTCTGTG TCCTGGGGCA TCAATGATAG TCACATAGTA CTTGCTGGTC TCAAATTTCC 000960 000961 ACAAAGAGAT ATCAATGGTG ATACCATGTT CACGCTCAGC TTTCAGTTTA TCCAAGACCC AGGCATACTT GAAGGAGCAC 001040 001041 TTTCCCATCT CAGCAGCCTC CTTCTCAAAT TTTTCGATGG TTCTTTTGTC GACGCCACCG CATTTGTAGA TCAGAT |
Predicted Small Protein
Name | NONHSAT097678_smProtein_488:664 |
Length | 59 |
Molecular weight | 6183.1821 |
Aromaticity | 0.0689655172414 |
Instability index | 57.3137931034 |
Isoelectric point | 9.36956787109 |
Runs | 8 |
Runs residual | 0.0186623721106 |
Runs probability | 0.0307034976152 |
Amino acid sequence | MQSRASSSVVPLALPSLRVTFHPLNQGMLALGSSVLSPFQPETGTNATVSVLWPIFLM |
Secondary structure | LLLLLLLLLLLLLLLLLEEEELLLLHHHHEELLLLLLLLLLLLLLLLEEEEEEEEELL |
PRMN | - |
PiMo | - |