NONHSAT098291
Revision as of 19:58, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098291 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
993 nt |
Genomic location |
chr4+:130054261..130055253 |
Exon number |
1 |
Exons |
130054261..130055253 |
Genome context |
|
Sequence |
000001 CTGTTCTCAT GCCGCATCCC CACATCTTGA GGCTCCTGCT TCAGGAATGG CGGGAGTGAG AGCCTTTTCT GATGATGTCG 000080
000081 ATGAAGGCTC ATCCCTCACC CCAGACACCT CTGGCCATTT GACTGAAGGC ACCCCAGGTA CCTTAGGGCA GGCCTCACTA 000160 000161 GTGATCCCAT CAGGGCCTCA TCTGCACGTT GTCCTTGTCC TCATCTGGTT GGAGCCTCTG GAGCCCCTCG AGGCACAGGC 000240 000241 ACATGTGAGG TGGCTTGCAG TCTGGAAGAC TTTCTGGGGG TGGTATTTTC AGGCTGAATT CCTTTAAATT CAATGAGGTT 000320 000321 GTTTTTGTGT TTGGAAATTC CACTGGAAAG TGACTGATGT TTGTGACCCT TTCTCCTTTT TCAGCTCCTG CTCCATATGC 000400 000401 AGCAATACAG GTACTTCCAG CACTGTTAAG CCAGTGCCAG CACCAGGGGA AGAGCGCCCT CAGGGACAGT GCTGGAGCTA 000480 000481 GAGGAAGTTC CACAGCCCTC TTGCTGCTGC CCTGGTACAG CCAAGGACCA GCCCAATGAG GAGCTGCCTG ACATCATGGC 000560 000561 ACCTACTGTA GCCACTGGCC TCAGCCCTGG ATCTGAAAGT GTGGCTGGAG CTAGAGGTGG CAGAGATGGG GTGGCCAACA 000640 000641 TGGCCCCAGC CAGCAGCTCC CACACTGCTC CTGGTCCTGG GCACAGTGGG AGTCATGGAG GTGGAGACCA GGGTGTGCAG 000720 000721 CCTGGGCTCT TCTGCCTCGC TGGAGAGAAG CTTCTCTCAT TAAACAGAGC TGTTGCTGTG CTCCTGCAGG ACCTGCTTGG 000800 000801 GCTACTGCTG CTGGGGTTGT ATATCTGCCT GCAAAAAGTG CTACAGAGCA GGAAAAGGAG CCTGTGAGGA GGCGTTCCAG 000880 000881 CAGCTCCTCC TGCCCCCAGA GGTGGTCTCT TCCTCCAGGC ATGGACGTCT GTCCTCAACT GGGCATCTGG GCTGTTTGTC 000960 000961 CCTGATGTGC TGCCAAGGAT GGGCTCTTCT TGA |
Predicted Small Protein
Name | NONHSAT098291_smProtein_356:538 |
Length | 61 |
Molecular weight | 6271.1433 |
Aromaticity | 0.0833333333333 |
Instability index | 52.9233333333 |
Isoelectric point | 9.18560791016 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.0448683978096 |
Amino acid sequence | MFVTLSPFSAPAPYAAIQVLPALLSQCQHQGKSALRDSAGARGSSTALLLLPWYSQGPAQ |
Secondary structure | LEEELLLLLLLLHHHHHHHHHHHHHHHHHLLHHHHHHHLLLLLLHHHHHHLHHHHLLLLL |
PRMN | - |
PiMo | - |