NONHSAT100548

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT100548

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1497 nt

Genomic location

chr5-:14663208..14664704

Exon number

1

Exons

14663208..14664704

Genome context

Sequence
000001 CGGGCTGAGT CGCCGGGGCC TGGAGGGGGA ACCGCGCGCT GCGGCTGCTG CGCTTGCTCC GTCCCCGGAC GCCGCTGGCT 000080
000081 TGCTTCCCTT GTCAGCTGTG TGGGGACTGG CAGAGGGTGT GAGAGCGGGA AACGACCGGA CGAGCGGCGG GGAGCGTCCT 000160
000161 GGGTGAGGAG GAGGAAGTCT GGTCTTAGGT GTGAAGGATG CTGACGCGTT CCGGCGCGTC GCGGTGCCAC TCTCGGCTTC 000240
000241 TGAGCGTTGC CCTACGCCGC AGCGGGTTTT CCTCAGCTGT GAAGCGCGGC TGCGTCCTGC CCGGGCTTCC CCCCGCCGGG 000320
000321 ACGGTTCCAA CGCCCGAGCC CAGCGGGCTT GGGCCTCCGC TGTCGGGCCA GGCTAGTTGC TCCGGGGCTG GGAGTTACGG 000400
000401 CACCGGGGTT GGGGCGGAGA AGACGAACTA GTTCAACTCG ACCCGGTTAA GCAAGCGCAG CAGTGTGTGT TCTTGGATCA 000480
000481 TAGTATTTCA TGTAAACATT TTGATTTAAG AGAAACAAAA GGGAAAATAT TAACCGTTTT CAAGCATCCA AAGGCGAAAT 000560
000561 GCTTCATCTC TGGGATGGAG TAGAGGAGTA GCCTCTGCGG TTGAGTTGCA GTCGTGGGTG CAAGAAGCAG CGCTGAAGCA 000640
000641 GAGTGCAGCC CCGGAATAGG GCGGGATGGA ATGGCCTGGG CAGTTCAGAA ACCCGCGAGG AGTCCAGGGC GGAACAGGTA 000720
000721 GGGAGCAGGG GATTGTATTG AAAGATGAAA CTGAAAGAGG GGTAGTGGAG ACCAGATCAT GAAAAGCCAT ATTAGGCTAA 000800
000801 CTGTGGCGCT TATGCTTAAT CCTCATTGAC AGATCTTGAG ATCATTTTGA AAAATCACTT TGTCTTCAGT TTGGTAAAAG 000880
000881 TTTGGAGAAG GGCAGGACTT GGAAGACCAG CTTAGGGAGA CTAAATAGTA GTGACCTCCA AGGGAGAAAC TGGACAGAAA 000960
000961 GAATATTTAT ATTTAGTGCC ACAGAACTCC GGGGGTATTG TTTTCTCCTT TAATTTTACT TGAAAAAGTA ATAAATGCAC 001040
001041 ATACTAAAAA ATTCAGAGTG TACAAAAGAA TATACAAAGA CTATTAAGGT GTGGGATTGA GGAGGGTTGA ACAGGATCCC 001120
001121 CCAAAATTCA CGTCCACCTA GACCCTCACG ATATTAACTT ACTTGGAAAT AGGGTTTTTG CAGATGTAAT TGGTTAAGAT 001200
001201 GAGGTCATAC TGGTATAGAA TGAGCCCTAA ATCGAATGGT TGGCGCCCTT AGAAGGGGAC ACATAGATAA ATGTGCACAG 001280
001281 AGGGAAGAAG GCCATTTGGA GATAGAAGCA GGGATTGGAG TGATGCAACT GGAAGCCAAG AAACGCCGCA GAATGCCAGG 001360
001361 AGCCAGCAGA AGCTAAGAAA AGGCAAAGAA GGATTATTCC AAAGTGCCTT CCGAAGAAGG TTGGCCCTGC CAAAAACCTG 001440
001441 ATTTCAGACT TCTAGCCCCC AAAACTGCAA GAGAATAAAT TTTGTTGTTT CAAGACA
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Predicted Small Protein

Name NONHSAT100548_smProtein_197:430
Length 78
Molecular weight 7567.5416
Aromaticity 0.025974025974
Instability index 60.4675324675
Isoelectric point 10.313293457
Runs 9
Runs residual 0.0191981931112
Runs probability 0.0290682839702
Amino acid sequence MLTRSGASRCHSRLLSVALRRSGFSSAVKRGCVLPGLPPAGTVPTPEPSGLGPPLSGQAS
CSGAGSYGTGVGAEKTN
Secondary structure LLLLLLLLHHHHHHHHHHHHHLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLEEE
ELLLLLLLLLLLLEELL
PRMN -
PiMo -