NONHSAT102019
Revision as of 20:16, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102019 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
836 nt |
Genomic location |
chr5+:70673331..70675060 |
Exon number |
2 |
Exons |
70673331..70673407,70674302..70675060 |
Genome context |
|
Sequence |
000001 AGTATTCTCA GACCACTTCT ACCAAAACAT AAATCTGTGA TTGTGATCTC TGAAAGTCAG TCCTTTTATC TACTCAAaag 000080
000081 aagacactaa ggttttcaga aattaaattg ctttttggaa aaggtgggag attctgggaa catagaaact tgaatccagt 000160 000161 tttcttcaac tccacgtcaa gACAGTTGCA TTGTGTGAGA AAATAGCTAC GGCCATTTGT GGTAAAATCA CATATATGCA 000240 000241 ATTATGTGAA ACTAATTGTG TATATGTATC TGTGTATGTG TGCGTGTACA ATATATAAAC TATCAATATT TATCAAAGTC 000320 000321 CGTATAGCTG CTAGCAATGA GGGGGATCTA GGATTCTATC ACATGATACC TTTTTATGAG GCCTTTGTTC TTTCCAGTAC 000400 000401 ATTTGTCAGC TCGTTCATGA AAGAGATTCT TAATTATTTA CTGAAATATC ACAAAAGTGA TGGTGAGCTA GGTTGCCACA 000480 000481 TTGATCCTGA TAGGTCCTTG ACAAATTCAT ATTGACTCTC CACAAATAAA ACTATAAGGC AGTTTTTCCC ATTGTGATGC 000560 000561 TTTTGTCTAC AATCTTAATT GTTAACTCTT CCAAAGAATA AACACACAAT ATATCAATTT TTTAACCCAT TTAGGTAGAA 000640 000641 ATATGGGTAT ATAGAAAGGA AGAAAGCAAG GTTAACGGTG AGCAGTGGCT AAATGAACAA GAGAACATTC AGTTAAGTAT 000720 000721 CTCATCTCCA AAATGGTATA AACTGTGGCA GAAAGTACTT TGTTGAATCA ATAGTTTCGA GACAGACATA CAGTAGGGAC 000800 000801 ATCGAAGGTA CAAAATAGAG CACTGATGAA GGAGTG |
Predicted Small Protein
Name | NONHSAT102019_smProtein_263:514 |
Length | 84 |
Molecular weight | 9566.0595 |
Aromaticity | 0.156626506024 |
Instability index | 57.2857831325 |
Isoelectric point | 6.23919677734 |
Runs | 13 |
Runs residual | 0.0165997322624 |
Runs probability | 0.0481771364124 |
Amino acid sequence | MYLCMCACTIYKLSIFIKVRIAASNEGDLGFYHMIPFYEAFVLSSTFVSSFMKEILNYLL KYHKSDGELGCHIDPDRSLTNSY |
Secondary structure | LEEEEEEEEEEELEEEEEEEEEELLLLLLLEEEELLHHHHLHHHHHHHHHHHHHHHHHHH HHHLLLLLLLEEELLLLLLLLLL |
PRMN | LLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiTTTTTTTTTTTTTTTTTTooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiii iiiiiiiiiiiiiiiiiiiiiii |