NONHSAT102809

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT102809

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1673 nt

Genomic location

chr5-:92889470..92907441

Exon number

5

Exons

92889470..92889569,92890580..92890701,92899070..92899169,92905596..92905708,92906204..92907441

Genome context

Sequence
000001 CCCTCTGGAA GCAAAAAGAG AAACGACTCC AATCACCGTC TATATCTTAT TGCATTGAGA GATAGCAGGT GTTTAGGCTG 000080
000081 CAGCTATTGT CTGCCTTCCT CCCTGAGCTC ACATAACAAG GATGAAAGAG TCTAAGGAAC TTAGTTTCCC CAAACGCTCT 000160
000161 TGCATAGGAG GGCGGGGAAA CTTCGGAATC AAGGACTTAA AGAAATGCAA TTGAGTCCCA ACTCGCAAAG TGTGTCAGTC 000240
000241 TCCATGTGGT TCCGTCCTTC CGCCGTCACT GTCTAGTCTC ATCTAGTGTC GTTCTTCTGC TTTCTGTAGA TCTCTAGGAA 000320
000321 CTCAGGATTC CCTGCCGCTT AGCCGTCGAG CTCCCGACCC CTCCGCATCC CTAGCCGGGA AGGACTGAGA GCTGAGCTCC 000400
000401 AAGGTCGTGG TCTGGTCCTC AGGGATGAGG TCCCGGGTCC AGACTCTTTC CTTGGTCAGC AACTCCTGCT TAGAAGCTCC 000480
000481 CCGCCCCGAA TGGAATCGTG ACCTGGCGCT AGGTCCCCCG CTGGGAGTGC CCGAGGCTTT CCTGAAGGCC CCAGGCCTTC 000560
000561 AGGCCGCCAG GGTCCTAAGG TGCCTGTGGC GGCCCCTCGT CCGCCTGAGC CCTGAGATCA GCGCGGCCCT CGGTGCTGCA 000640
000641 GGGCCCCAGG GCGGCCAGGA AACACCTGCC CGAAGTCCAG GCCCGGCCCC ACTGCAGTCC AGGACCCTAA TTCTCGAGTG 000720
000721 TCTCTTCACG ACCCTGACCC CGGAAGGGCG CTCCCTTGCG AACGAATTTT TAATTCTGCG GACTGGGATC CCTTGTAGGG 000800
000801 GCCCCTCCGA GGGCCCCTCC CACCCCTTTC CCTGGACTAG CGAACTCCGA CCCTAAGCGC GGCCCCGCAG GGAGCGGATC 000880
000881 CCGGAAGCTA GGCCCATATC CGGCCGCGGA GCCTTGCGCG CGGGGTTGGC TGCCGGGAGG TCGACGCTAG TGCGGTcccc 000960
000961 cgcgcggcgg aggggcccgg gccgcggTAT CTGCGCACTG AGACGTCGGC GGAAGGCTAG AGGCCGTGCT CTCGCCCCCG 001040
001041 CAGAAGGCCA CCACTCCTTG AGAAGGCCGG AGGGACAAAG CACCGGGCCT GCGCCGGGGG CATTCAAGAA GGAAGCCAGG 001120
001121 CCCGACCGGG GGTGGCGCAC GCTTCCCGAA CCCCAGGCCC ACGGCCCGGT TCCGCGCGGG CAGTTGGCGC CCCCTCGGGT 001200
001201 CGGCACAGCA GACCTCTTAG TAATGGTCCC CAGGGAGTAC AGGGACTGAG AAACGGAAAT ACTACCATCC TCCAGCCAAT 001280
001281 CTGTTGGGAG GACTGCTTGC AGAGGACTCG TGCTCCAGAT GTTGCACTAG AGGCGCTGCA AGTGTGAGCA GCAGGTAGAT 001360
001361 GAAACTCAAG AGAAAAGGTG TGGATAAATG AAACTAGCCC ATGATGAACC TGTTTTCTCC GTGACCACAA TATTAACCAG 001440
001441 GATGAATGGC GGTGGCAGTG GGCCTGCATC ACAGGTTGCA GCAGATGTTC TCAATATTTC TATTAAAATT TCCTTATTTC 001520
001521 CATATGCAAG AGGAGCCCCA GAGCTGCATC CTTATGGTAG CTACCATGCC GTGatgtaag ctgccattca ctggggagct 001600
001601 ttggcaatag aattggctag atcaggaagc ctatgtcaac tatggaacaa caacttgcag ctcatctcta ttg
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Predicted Small Protein

Name NONHSAT102809_smProtein_1445:1573
Length 43
Molecular weight 4921.9126
Aromaticity 0.119047619048
Instability index 78.5857142857
Isoelectric point 6.80682373047
Runs 7
Runs residual 0.00949367088608
Runs probability 0.0212986095339
Amino acid sequence MAVAVGLHHRLQQMFSIFLLKFPYFHMQEEPQSCILMVATMP
Secondary structure LHHHLHHHHHHHHHHHHHHHLLLLLLLLLLLLEEEEEEEELL
PRMN -
PiMo -