NONHSAT108301

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT108301

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

4732 nt

Genomic location

chr6+:26630055..26634786

Exon number

1

Exons

26630055..26634786

Genome context

Sequence
000001 TATTTTGCAA AATTAGTACA ATCATACAAC CTGGATATTG ACAATGATAC AGCCAAGCTA CAGAACATTT CTATCACCCC 000080
000081 ATGGATACAT CATGTATCCT TGGATAACTA CACCTACCTC ACTCCCCAAC CCTTATACAT GACAACCACT AAGCTGTTCA 000160
000161 TTTCTATAAT TTATCATTTT AAGAATGTTA TAAATGGAAT CATACAGTAT ATAAACTTTA GTATTGGCTT TTTTCACTCA 000240
000241 GAACAATTAT TTTAATTTTC TTACTAGTAG ATATTATTTT CCTGCTTGAG GAATTATGAT TTATTTTTCT AAGGACAAGA 000320
000321 CAATATGGAT GATCAGGGTT TTTTTGTTTG TTTTTTTGAG ATGGAGTTTT GCTCTTGTTG CCCAGGCTGG AGTGCAATGG 000400
000401 AGTGATCTCG GCTCACCGCA ACCTCTGCCT CCCGGGTTCA AGCGATTCTC CTGCCTCAGC CTCCCAAGTA GCTGGGATTA 000480
000481 CAGGCATGCG CCACCATGCC CACCTAATTT TATATTCTTA GTAGGGATGG GGTTTCTCCA TGTTGGTCAG GCTGGCCTTG 000560
000561 AATTCCTGAC CTCAGGTGAT CCGCCCACCT CGGCCTCTCA AAGTGCTGGA TTATAGGTTT GAGCCACTGT GTCTGGCCTG 000640
000641 GATGATCAGG TTTTATTCTT TATTAGTTGA GATAATTATA TTTGTAATTG AATTATGATT ATTGAACTGC ATTCTTTTTG 000720
000721 GTTGTTGATT TCTCATTTTC TCAAAGCAGA TGCCCAAAAT CTGTGGAGGT GGTTGTCATT GCAAAGAAGT ACCACAGGGC 000800
000801 TTAAAAAGGC AAAGTTCACC CCAATGAACT TCTTAGTATT CAAAAACAGG TTCAGTTTTT GAAAAATAAC CTAGACTGAA 000880
000881 GGAAACAATC ATATCAAGCC CACAGGAAAA AATGAAGCAC AGGGTCAAAA TGATCGTCTC TTTAGTTGCT TTCATCCCAG 000960
000961 GGCTTTTTTT TCTTGGAGAT GGAGTTTCAC TCCTGTTACC CAGGCTGGAG TGCAATGGTG CGATCTCGGC TCACTGCAAC 001040
001041 CTTTGCCTCC CGGGTTCAAG TGATTATCCT GCCTCAGCCT CCCGAGTAGC TGGGATACAG GCATGCACCA CCACGCCCAG 001120
001121 CTAATTTTGT ATTTTTAGTA GAGATGGGGT TTCTCCATGT TGGTCAGGTT GGTCTCGAAC TCTCAACCTC AGGTGATCCG 001200
001201 CCTGCCTCAG CCTCCCAAAG TGCTGGGATT ACAGGCCTGA ACCACCGCGC CCGGCCCCAG GGTTCATTTT GAATTAGGGG 001280
001281 CCCGACCTGT GAAGGTGCTG TATTTGCTCG TGATGTCTGT AGAGGGGATG CATCCTATAC CCACTCGTCC AGCACATAAA 001360
001361 ACCCAGGAGG GGAAACGTCA TGAATGTGAA ATGCCATGAA CGTGAGAAAG AATCACCTAA TAAAATTATC CGTTAGCAAA 001440
001441 ACAGAGCAAG ATTTCACAAT GTATCTGGAT ACAGTCTCAT TCTTGAGGGC TGTAATTGAG ATAAAATTAA GTTGGAAAAT 001520
001521 ATGAGTAAAT TAAATTAAGA ATTCAAACAA AAAGGAGTAA AGGGCACACA ATGGTTTTCT GGTTTTGAGC ACTGATCAAT 001600
001601 AGGGGTTACA AAGGCCAATG ATGATGGCAT AAAGAATGCT TAAGTGGCTT GTCTAACAGA TGGAAAGGCC ACGTGACACT 001680
001681 GTGTAGCTAT TTGTCTTAAA AATAACATAA TGTATGAGAG TTCTCAAGAC CAAAGCTTAA GAATCCTTGG GGATTCCTAT 001760
001761 AATACAAGCC ACTAACATGT GGACCAATGA GAAGTGGGTT ATTAGTAGGC ATATGGGCCT CTGCTTGAGA CTCACAATGA 001840
001841 AAATATGAGC ATAGCTCACA AAGAGAATGG CATTCCCCAT GACATCAAGT CTAGCTTAGA AAAGAAAAGC GGGCAGGTGC 001920
001921 AGTGGCTTAG TTCTGTAATC CCAGCACTTT GGAAGGCTGA GGTGGGCAGA TCACTTCAGC TTGGGCTCAG GAGTTCAAGT 002000
002001 CCAGCTGGAC AACATAGTGA AAACCCCATC TCTACAAAAA TTAGCTGGGT GTGGTGACTT GTCCCTGTAG TCCCAGCTAC 002080
002081 TCAGGAGGCT GAGGTGGGAG AATGGCTGGA GCCTAGGAGG TGAAAGTTGC AGTAAGCAGA GACTGCACCA CGGTACTCCA 002160
002161 GCCTGGGCAA CAGACACACA CCTTGTCTCA AAAAATAAAT ACAATAAATA AAATAAAATA AAACAATTGC CAGGATGCCA 002240
002241 TGTGTTGAAA TCAATCCAAC ACTTTATAAG CTGCGTAACT GCAGGATCAA CTTCTATAAC CTGTTTTTTA AAATTCTGCA 002320
002321 ATTTAGTGAT TATTACCTGT GAGGACTAAA CTCCAGTTTT TTATCCTGCC TAAATTCCTA TCTAAGGGGT TTGGAGAGTC 002400
002401 ATGCCCTGAA AATCATAAAT TCTCATCAGA TGGGTTTTAT TTAACCCTAT AGATTGTGAC TTACTTTCCA AACTGACTCT 002480
002481 GCTGTATGGT TAACTTCTAG GTTTTTATTT GGTGGAGAAG ATTGCTCTTG TCACTTTGGA GTCTCATGCA TTTGAGTTCA 002560
002561 ATTGGAACTG AGCTAAGTGT GTATGTTACA ATGGCATTTG TATTATTTAG CAGCATTTGC AGCCCACCTC CATTTCCTAA 002640
002641 ATCCATTTGT CACACTCTTA GACTGGTCTG TGTTCTTGCA TCTGGGAAAG GAGATAGCAG AAAGTAGCAA AATGGGTACT 002720
002721 GGGTTTTTTG TTTGTTTGTT TGTTTGTTTT TTGTAGCTCT TGAGTTTCAG AAGCAGAACC TATTACAGCA ATGAAGGGGC 002800
002801 CACAAAGTCA GTACTCTAAG GGAAAACAAT CATACAACTC AATCTTTATG CCATTTGGCT TGAGTTTTTT TGTTTTTTTT 002880
002881 TTTCCAGATA GGGTCTGGCT CTGTCACCCA GGCTGGAGAG CAGTGGCACA ATCTCAGCTT TCTGCAGCCT CTACCTCCTG 002960
002961 GGCACAAGCG ATCCTGCCAC CTCAGCCTCC AGAGTAGCTA GGACTACAGG TGGGCACTAC CATGCCTGGC TAATTTTTGT 003040
003041 AGAGACAGGG TCTTGCCAGT CTGGTCTCTA ACTCCTGAGC TCAAGCAATC CGCCTGCCTC CACTTCCCAA AGTACTGGGT 003120
003121 TACAGGTATA AGCCACCGTG TTTGGCTTCA TTCTGCTTGA GTCTAAGTGT CTAAGTGTTT GCATCAAGTG TCTTAGATAC 003200
003201 ATAAATGCCA CCACTTAAAA ATCTTAATTA TTTTTTCCTG CTTTTCCTAG TAACTGTCCT GTCTAGGGGA CTACCTTTTT 003280
003281 TATTAGCTTT TTCAAAGAAT AATAAGGTGT TGGTTTTACT GATTCTCTGC ATTATCTTTT TGTTATTTTC TATTAACTTT 003360
003361 CCTGTCTAGG GGACTATCTT TTTTATTAGC TTTTTCAAAG AATAAGGTGT TGGCCAGGAT GGTCTCCATC TCTTGACCTC 003440
003441 GTGATCCACC CGCCTCAGCC TCCCAAAGTG CTGGGATTAC AGGCGTGAGC CACTGCGTCT GGCCTACCCC AACTTTTTAA 003520
003521 GTTTCCTTTG CCAGATGGAA GGATTCCCTC TGCAAGTGTT AACTGCTTTC AGCTTCTCTC ACTCATTTAA AATCCAAATC 003600
003601 CCTGCCTGGG GAAAGTGATG ACACAAGCTG ATGTTTCAGG GACAAAGAAG CTTCAATTGC ACTATGAGTT TCTTTTCTCA 003680
003681 ATAAACAATG TAAAGACCAT TTCAAGAAAC ACTTGCGGTG TGTGCGCTGG ATAGCACTTT TCCCTGTCTA CTTCACCAGA 003760
003761 GACACTGAAG CACACATCAT TTCTCTTTCA GTTACTTCTG GGGGTCACGG TTATTATTTT TCCCAGAAAT ATTTCTCACA 003840
003841 ACAGTCCACT TCAATGTTGG GAGTAGTATC ACTTTAAGTT AGAAAAATAA GCATGAAGGC TGCAAGTCTT GTTCTACCTA 003920
003921 CACAACTCTA TATGAATCTC AGGAGGAAAA AACAAACTTA AAGCTGTACC TTTTCCCTTC CCTGTTTCAT CCACATCATA 004000
004001 CCTCCTTCTT ATCCTCTTCT CACAATGAAA GCCACTTAAA ACTCTGGCAT CTACTCTGTT GGTAGAGCAG ACAGACATAA 004080
004081 ACTAGGACAA ACTTTATAAT GGTGGGTAAA TTAGAGCAAC TATTTTTATA CCATCTCCAT CCCACTCTAA TTCAACAAAT 004160
004161 AAGACCAAGA GGGAAGAATT GGAACCAAAT GTGGATTTCA CTAGGAATTA TAAATGTAAA ATCTTCCCTA ATTTTGAGGG 004240
004241 GGTCACTCAC ACAAAAAAAC CATAGATGGT TTTGCTGCTA ATGAATTTCA GCAGGGCCTC AAACATGGTC AGTTCAAACT 004320
004321 ATTAGCCCCA TTTATGGAAT GTGGTGCAGA GGTTCCAAAA GGATGCAATG TCCACAGCGG AGCATAGACA ATATTCCTTC 004400
004401 TGTTCCTCTC TGCCTCGGCA TCCAAAATTG CTGGAATTAT AGAGATGGTC CAGTGGTTAT CTCTACCTCC ATGTCTAAGT 004480
004481 ATCACATTAT TAACCACTTC ATTCTAATCC AAGTGTAGAG GAAATGCTGT TTCTCTCAGT ACAGTGGAGA CGGAAATGGA 004560
004561 GTTTTTCAGA ACAAATGTTT ATTTAATAAT TAAGGGCAAA CAAAAACATT AAAGCATAGG AATACATCAA CTGAATACAA 004640
004641 GTTGTCTTGT TTGGTCTGAA ATCTTGAAAA AGTTAATCTA ACTACTTACC TGAGGTAGAT TTAGGTTGGC ACTGCTTCAA 004720
004721 GGGAACCTCC GT
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Predicted Small Protein

Name NONHSAT108301_smProtein_1844:2056
Length 71
Molecular weight 7704.6923
Aromaticity 0.0571428571429
Instability index 58.4271428571
Isoelectric point 9.69659423828
Runs 8
Runs residual 0.0305516265912
Runs probability 0.0434552199258
Amino acid sequence MSIAHKENGIPHDIKSSLEKKSGQVQWLSSVIPALWKAEVGRSLQLGLRSSSPAGQHSEN
PISTKISWVW
Secondary structure LLLLLLLLLLLLLLHHHHHHLLLLEEEHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL
LLEEEEEEEL
PRMN -
PiMo -