NONHSAT108770
Revision as of 20:56, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT108770 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
819 nt |
Genomic location |
chr6+:31409367..31416354 |
Exon number |
2 |
Exons |
31409367..31410088,31416258..31416354 |
Genome context |
|
Sequence |
000001 AAGAATTCTA GAGCCAGACC TTGTTACTTC ACAATTGCCT CACGTTGCAG GACAAGCAAA TCTAGCCTGA GTCCTGTGGA 000080
000081 TTCCAGGGCT GCTCAGGAGA CGCCTCCATC CTGGCGTGGA TGACCTCAGG ATCAGCCCCG TCTGCCCCAC TCAGCCCGCA 000160 000161 GCCTGGTCCC CGAAAGCGCT CAGTCAGAAT CCGAGAGCAC TGTGGCGGCG CCCCCGTGTG GCCACAGGAC TGAAGACAGA 000240 000241 GGACCCCGCT CCCCTTTCTC CCCAGCCAGG ACGTCCCAGG CTCTCCCCCT GTTCCCCGCA CCTGGACGGG ACTCTGCACA 000320 000321 GAAGAGAGTC TCCCGGTCTC GTGTCAGGCT CTGAGTTCAT CCAGCTTCCC AAAATCCATG TTGATATGAA CGTTTTCTCC 000400 000401 CACAACTGAT TGACTGGACT TTTGTCTCAG GGCAGAGGGA GGCCTCCAGA CCAAAACAGC AGGATCAGGT CTGGAGCTGA 000480 000481 CTCAACCCCA AACCCTTGCT AATGCACGAC CCAGTCCCCC AGCCTCCAGG ATGGGACCTT GGCCTCCTGT CCCCTCCCTT 000560 000561 GTTCCTGCCA CTGCTCCTGC AGGTGGAGGC TGCTCATCCC AGGAATCAGT CTGTGAGCTC CAACCTTGGG GCCTCGGTCC 000640 000641 AGGAAGGAGG GAGGCTCCAG AGAGCAGAAG GGAGATGAAA TGGATCATAA GAGAAGAAGG AATCATACCA AACACtggaa 000720 000721 ctacatacat tagcataggc tgacacaggg tcaagaccaa caatatcaac catcttcagc cttcacatct tgtcccactg 000800 000801 gaagattttc aggtgtaat |
Predicted Small Protein
Name | NONHSAT108770_smProtein_530:742 |
Length | 71 |
Molecular weight | 7460.4232 |
Aromaticity | 0.0571428571429 |
Instability index | 78.0014285714 |
Isoelectric point | 5.22991943359 |
Runs | 10 |
Runs residual | 0.0019801980198 |
Runs probability | 0.036742624978 |
Amino acid sequence | MGPWPPVPSLVPATAPAGGGCSSQESVCELQPWGLGPGRREAPESRREMKWIIREEGIIP NTGTTYISIG |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLHHHHEEEELLLLLLLLLLLLHHHHHHHHHHHHLLLEL LLLLEEEEEL |
PRMN | - |
PiMo | - |