NONHSAT112878
Revision as of 20:59, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112878 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
566 nt |
Genomic location |
chr6+:43188304..43189016 |
Exon number |
2 |
Exons |
43188304..43188337,43188485..43189016 |
Genome context |
|
Sequence |
000001 TGCCATCGTC TCCTCGCCAG AGGTCATCTC CAAGTATGAG AAGGCGCTCC TGCGTGGCTA TGTGGAGAGC TGCTCCAACC 000080
000081 TGACCTGGTG CACCAACCCC CAGGGCTGCG ACCGCATCCT GTGCCGCCAG GGCCTGGGCT GTGGGACCAC CTGCTCCAAG 000160 000161 TGTGGCTGGG CCTCTTGCTT CAACTGTAGC TTCCCTGAGG TGGGAGCCCC ACACTGGCCC TGACCCTGAG CAAGGATTCA 000240 000241 CACTCCTTCC CTGCTTAATA TCCCCACCCC GCCACACACA CAGACTGTGA CTTGTCCTTC CTCAGCCTCT GCCACCCAGT 000320 000321 TGAGCTCTGT TCCTCTTCCT GGAGCCCTCC AAATGTGATC TGTGCCTGCT CCCCTCTCTC CTGTGCACAC CAGCCATGCT 000400 000401 GCCCTCACGG CTCAGCTGTG TCCCCACCAT GCCCTCTTGC CTTAGGCACA CTACCCTGCT AGCTGTGGCC ATATGTCTCA 000480 000481 GTGGGTCGAC GACGGTGGCT ACTATGACGG CATGAGCGTG GAGGCGCAGA GCAAGCACCT GGCCAAGCTC ATCTCCAAGC 000560 000561 GCTGTC |
Predicted Small Protein
Name | NONHSAT112878_smProtein_395:514 |
Length | 40 |
Molecular weight | 4035.8612 |
Aromaticity | 0.0 |
Instability index | 77.5692307692 |
Isoelectric point | 8.71185302734 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0510510510511 |
Amino acid sequence | MLPSRLSCVPTMPSCLRHTTLLAVAICLSGSTTVATMTA |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooo |