NONHSAT118950

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT118950

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2049 nt

Genomic location

chr7+:5878697..5888012

Exon number

4

Exons

5878697..5878835,5879580..5879706,5880321..5880487,5886397..5888012

Genome context

Sequence
000001 GTAGTTTCTA CGAGActttt ctgtgcctcc tttgcccatg ccaggcctct tgctaggaat atccttcaga catcagatca 000080
000081 ttctgtttat ctttcgtgat tctactcccc tgtgatctcc taggaagctt cacttgacaG GGTCACTGTC ATTCGGGGAC 000160
000161 GTGGCTGTGG GCTTCACCCG GAAAGAGTGG CAGCAGCTGG ACCTGGAGCA GAGGACCCTG TACCAGGATG TGATGCTGGA 000240
000241 GAACTACAGC CACCTGCTCT CTGTGGGCTG AACTGTCTGC TTGCTTGGAA GGCCCAGCTG GCTCAGCACA AATCCTTTAA 000320
000321 CCGTTTCTCC CCAAGAGGGT GTCAAGTCAG CAAACCAGCT GTGATCTCCA GTTTGGAGCA GGGGAAGGAG CCATGGATGG 000400
000401 AGGAGGAAGA GATAAGGACG TGGAGCTTCC CAGAAGAAGT TTGGCAAGTT GCTACCCAGC CAGATAGCCA ACAGCAACAC 000480
000481 GAAGACCAAC ATTTGAGCCA TACGTTTCTA GACAAGAAAG ACTGGACCGG AAATGAGCTT CATGAATGTA ACGAACTTGG 000560
000561 AAAAAAACTC CATCAGAACC CAAACCTCCT TCCATCAAAA CAGCAGGTCC GCACACGTGA CTTGTGCAGA AAGAGTTTGA 000640
000641 TGTGTAACCT GGACTTCACT CCTAACGCCT ACCTGGCGAG GAGGAGATTT CAGTGCGACG GCCACGGAAA CTTCTTCTCT 000720
000721 GTTCGAAACT TGAAACTCCA CCTTCAGGAG CGAATCCACG CGGAGGTCAC CAGTGTGGAA GTGCTTTAAG CTGTGACGAG 000800
000801 GGAGTTCCTG CAGCTCAGGG AGCCAGTAGT GAGAAACCCC ACGAATGCAC GAAGTGTGGG AAAGCCTTGT GCTGCAGATC 000880
000881 GGACCTCAGG GTACATCACG GGGTCCACGC GGGGGAGAAG TCCTCTGCGT GCAGTGAACG GGGGAGTGGT TTCAGGGAGA 000960
000961 AGCTTTGCCC TGACAAACAG GGAACTCACA CAAAGGAGAA ACCCGCTAGA GACAGCAGAA GTGGTAAAAC GATCTTCCGG 001040
001041 AAGACACGCC TGTGTGTCCC GGGCACAGTT CACGCCGGAG CGAAGCCTTA CAAGTGTTGG GAGTGTGAGA AAACCTCCCA 001120
001121 CAAGTCGCGC CTCATCGAGC ACCTTCGCTC CCACACGGGG GAGAAGCCCT GCGGCTGCAG GGAATGCGGA AAGGCCTTTT 001200
001201 TCCAGAAGTC ACACCTCATC CTGCGTCAGA GGACTCACAC GGGGGAGAAG CCCTGCGACT GCGCGGAGTG CGGGAAAGCT 001280
001281 GCTCCCAGGA CTCCTGCCTC CTGACCCACA GGCGGACTCG CGGGGAAGAA ACCGTACGAG TGCTCCGACT GCGGGAAGAC 001360
001361 CTCCCGGAAG GCGAACCTCA TCCGCCACCA CGGGATCCAC ACGAGGGAGA AGCTGCATGG GTGAAGAGAC CGTGGGATCG 001440
001441 TCACAAAGTC ACATCACGAG GTCGCCGAAC CTCTAGGAGG GACATCGCCA GGGAAACAGC CCTCAACCAA AACTACGACG 001520
001521 CCACCCTAGG CAGAGGTCCC ATATCGGGGT GAAATTCGGC CACTTTGGTG GCTTAAGGAA GGCATGGTCA gctgggcgct 001600
001601 gtggctcacg cctgtaatcc cagcgctttg ggacgccgag gcgagtggat cacctgaggt caggagttca agaccagtct 001680
001681 ggccaacatg gtgaaagctc ggctctacta aaagtacaaa aaattagccg ggaattgtgg caggcgcctg taattccagc 001760
001761 tactcgggag gctgaggcag gagaatcggt tgaacctggg aggcggagat tgcagtgagt cgaggtcgca ccactgcact 001840
001841 ccagcttggg tgacagagtg agactcagtc tcaaaaacaa acaacaaaaa aGCATGGTCT GTTAAAACTA ACGACGGAAG 001920
001921 GGTAATGGTA TGCTAGAGTG ATCTATTTTC GTAGGTGTAC tttttttttt tgagacggag tcctcgttct atcgcccagt 002000
002001 ctggagggca gtggtgccat ctcggctcac tgcagcctct gcctcccgg
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Predicted Small Protein

Name NONHSAT118950_smProtein_1583:1693
Length 37
Molecular weight 4079.6352
Aromaticity 0.138888888889
Instability index 78.4944444444
Isoelectric point 4.67706298828
Runs 6
Runs residual 0.0137917637918
Runs probability 0.0257904963788
Amino acid sequence MVSWALWLTPVIPALWDAEASGSPEVRSSRPVWPTW
Secondary structure LLEEHHHHLLLLHHHHHLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -