NONHSAT119425
Revision as of 21:34, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119425 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1109 nt |
Genomic location |
chr7+:20371600..20392980 |
Exon number |
2 |
Exons |
20371600..20371646,20391938..20392980 |
Genome context |
|
Sequence |
000001 GTCTTGGGCT GGCACGAAGA GCTGCCCGGC CAGAGCATCC CGGCCAGGTG AGTGTCAGAA GACAAATTGA AGTATTCAGC 000080
000081 TAAATAAGCA ACTGCAAAAC TGAATTTATT CCTCTTCAAG AACTACTCTT CTTGTATGTT GAGTGACCAT TTGGCTGCCA 000160 000161 AGAGAAACTG CTTTGCCTAG GAAATAATAT GGACTGAAAA ATCAGTTTCA AACACAAATG AAAAATATTC CTTATGTTTG 000240 000241 GTCATCTTCT TTCCACATCA AATATACATG TAAAGATGTA TATAAGATAT AATCTGAAGA TAATCAAACA GCTATTAACT 000320 000321 GGATTTCTGC ATTTCGCCTG TCCTTCAAAA CCAGCCTCAA GTCTACCTTT ATGTTGAGAG AGTGTATCTT TAACTCATGG 000400 000401 TGTTCGCTTT CTCCTTTCAC ATTTCCTGTA AACTCATCAT GAATTGCCTT GTTTATTGTT TTGATTTCTC ATTCAACAAC 000480 000481 ACCGGAATAC TCTGTGTTTA GGGTAACCTT AGACTTCAGT TTTCCTGAGG AGTTTCAGTT TACACGTCTT GCACCGGTAC 000560 000561 AATTAACAGT GCCCCTTTCA GGTTAAAAAG TGTCTCAGTG TAGTTCATAA ATTATATAGT CACCCCATGT GTGCAGCAAT 000640 000641 CAGAGCTTTT TCAATGCAAA GTTGATTATG ATGGGCATAA ATGAATCATA ATAAAAAGTT CTAGTATGAT CCCATCTGAC 000720 000721 TGGGCTTCTT GTGATGGCCC ATTTCAACAC CATGGGTGTC ATTAGTGGCT TCACAATGGT TCTTCTTGTA AATTCCCTCA 000800 000801 TGACCTAGAG TTTTGATTTA TGCCATCCTA GCCCACTTTA AGCTCTGACT CATGCTGGGA TTGCCCTAAA CAGGGCAGGG 000880 000881 CAGACTAATG GAATGCGTTG CATTGTCCTA ACATTTCTTA ACCTGCCCAA GGTTGAACAT GCTTGTTTGT TTTTCTTTTG 000960 000961 CTCTCCAAAA ATCTTTATGC TAGCGTAAAG GCCTGTTGTA ATCACATAAA TTACTCACTA TGTAACAGGA GAAGTTGAAA 001040 001041 TTTGTCCCTG AAACATAAAG ATTATATATA ATAAAAGCCT TAAAAACCTA AAAAAAAAAA AAAAAAAAA |
Predicted Small Protein
Name | NONHSAT119425_smProtein_233:376 |
Length | 48 |
Molecular weight | 5333.4086 |
Aromaticity | 0.106382978723 |
Instability index | 55.3510638298 |
Isoelectric point | 9.78643798828 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0127438362732 |
Amino acid sequence | MFGHLLSTSNIHVKMYIRYNLKIIKQLLTGFLHFACPSKPASSLPLC |
Secondary structure | LLLLHHHLLLHHHHHHHHHHHHHHHHHHHLLLLEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |