NONHSAT122715
Revision as of 21:48, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122715 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
665 nt |
Genomic location |
chr7+:107384394..107389761 |
Exon number |
2 |
Exons |
107384394..107384621,107389325..107389761 |
Genome context |
|
Sequence |
000001 TTCGCGCGCT CGCTCTTTCT GCCTCCGCCC GAACTATGCC TGAGTCCCTC ACAGGAGTTG GATAGTAGAG GCGAGAGAAG 000080
000081 GAAGTCTTTG CAGGCCAAAA TTGGGACAAC CTGCTTGGAC TTCCGCCTCC CGGCCTCCGG AAGGCAGTGC GCACGCGCTC 000160 000161 GCTGCGACTC CGGCGCGGTT GACTTCCGCT CCCACTGTGC TCTGCGAGCC GAATCATGGA TCACACTGAC AATGAGTTAC 000240 000241 AAGGCACTAA TAGTTCTGGA TCCTTGGGTG GTCTTGATGT TCGCAGACGA ATTCCTATAA AGCTCATCTC CAAACAAGCA 000320 000321 AACAAAGCGA AACCTGCACC GCGAACTCAA AGAACTATAA ACAGGATGCC TGCAAAGGCT CCACCTGGTG ATGAAGGTAA 000400 000401 TTTGTTTAAC TAATAGGTCC AACACTCTTT CTGTTTTATC TGATTGCTTC GGACAGTCTG TGTGATCTTA TAGCTACCTC 000480 000481 TTTTTGTCTT ACATATTCTA TTCATTCTTC AACCTTCTTG TTTGACTTCT CATTGTAGCA CATTGTATTT TTATTTTCCT 000560 000561 TTATAAATAT TTTTTGATTT GGTTCCTTTT GTTGTTGAAA GCAATACTGC CCATTGTTCA GTAATCTCAA CAGTATTGCA 000640 000641 GAAAGCATAA CATTAAAAGT AAAAT |
Predicted Small Protein
Name | NONHSAT122715_smProtein_215:412 |
Length | 66 |
Molecular weight | 7080.9396 |
Aromaticity | 0.0153846153846 |
Instability index | 53.5830769231 |
Isoelectric point | 10.507019043 |
Runs | 8 |
Runs residual | 0.0272115384615 |
Runs probability | 0.0414237767179 |
Amino acid sequence | MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKAKPAPRTQRTINRMPAKAPPGDE GNLFN |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLEEEEELLEEEEHHHLLLLLLLLLHHHHLLLLLLLLLLLL LLLLL |
PRMN | - |
PiMo | - |