NONHSAT124163
Revision as of 21:55, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124163 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1338 nt |
Genomic location |
chr7-:150709341..150710995 |
Exon number |
2 |
Exons |
150709341..150710496,150710814..150710995 |
Genome context |
|
Sequence |
000001 CGATGACGTC GCCGGCCTCG TCCAGCTCCA TGTCGCCCTC CGTCGCCAGG ATGCGCTGCA CGGTCTGCAG GACGTTGGTT 000080
000081 GCCATGGTAA CATCGCCGCA GACAAACATG TGGCCCCGCT CGAGGCACAG CACGCGGTGC ACCTCCGCAG CCAGCTCCGT 000160 000161 CCTCAGGATG TCCTGCACGT AGGTTACCAT TGCGCCCTCA GGGTCTCACA CCTTGGGGTT GTCAGGTTCC CGGGAGAAGG 000240 000241 CGGTGAGGAC TCGGCCAAAC ACCCCGCGCT GCTGGGCGTT CTGCACCTCG TCGCGGTAGA GATGGTCAAG TTGGGAGCAT 000320 000321 CGGCAGCCGA ACACCAAAGT CATGGGAGTG GGCTGCAGCC CTGCAAGCAA CCCCGCGCTT GGGAAGGCTC TTCTCCGGGG 000400 000401 CACAGTGCTA GTGGGGCCTC CCCACAGGCC ACCGTCGCCC AGCCTGGCAG CCCAGCGTTT TGGGCTGAAA CCACCATTAC 000480 000481 TTTGGCTGTT TCATCTCTAA GAGAGTGTAG AATGCTTTCA CAGAGACCCT GCACAGCCCT GATTTACAGA GGGAAGGGAA 000560 000561 GCGCGGGTGA GGTGGTGGCC CCTGGTGGAG CTGCGCTAGA ATGCGCGGCT TCGGACTCAG AATTCCATGC CCTTTGCATT 000640 000641 GTGTGACATC GCAGTCCCCT TCCCCGCTCC CACTTCATAT TCTCCCATAC TTATAACTCT CCTCCCAGTC ACAGCCCTCT 000720 000721 TCTTTTGATT GACAGACCAC CCTGGGCACC CCATGCTCAA TATGAACACC TTGTAGCATC CTTAGGTCTT GGACAGACCT 000800 000801 CGGTCAGCTC TGGCACAGTC AAGAATCCAC CTTGGGCAGT TCTTCTTTGA GTCTTAGCCC TAATCCCTTT GAAAATTCTA 000880 000881 TTTTCCTTTG TCCTCAATCC AGTCAACACC TACTATGTAC CAGGCACCAG GAAGCCAGAA GCTCAGGGCC CAGCCCTTGC 000960 000961 CTTTGGTACC TGCCCTCCCC TTGGTCTCAT GAGCGTCTTT TCAGCTTTGT GGACTTTGTT TCCTGCCCTC TCTTTCCTAT 001040 001041 TTCCTGCCTT CCAGCCCCAC CCCTCTGTCC CTAGATTGTG TGACTCCCTT CAGGCAGTCC TTTAGTCCCC AGCCTCACCT 001120 001121 TTGCTCTCAA TGTCATGCAG CCGCTCCTGC CAGAATCCCC GGAAGGGGGC AATGCCAGTG CCTGGACCCA CCAGGATGCA 001200 001201 GGGCAAGCTG GGATCGGGTG GCAGCCGGAA GGAGGGAGCC CTGGCAGGAG AGACACTCCA TCAGGTCCCC TTTGCCTTTC 001280 001281 CTGCTCCACC ATTCTCACCA TGCAGGGTGG GTGGAGCAAG GAGGACCCAA GTTCTTCC |
Predicted Small Protein
Name | NONHSAT124163_smProtein_2:181 |
Length | 60 |
Molecular weight | 6370.3777 |
Aromaticity | 0.0169491525424 |
Instability index | 102.230508475 |
Isoelectric point | 11.6050415039 |
Runs | 8 |
Runs residual | 0.00886331830197 |
Runs probability | 0.0489423246776 |
Amino acid sequence | MTSPASSSSMSPSVARMRCTVCRTLVAMVTSPQTNMWPRSRHSTRCTSAASSVLRMSCT |
Secondary structure | LLLLLLLLLLLHHHHEEEEEEEEEEEEEEELLLLLLLLLLLLLLEEEELLEEEEEEELL |
PRMN | - |
PiMo | - |