NONHSAT124163

From LncRNAWiki
Revision as of 21:55, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT124163

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1338 nt

Genomic location

chr7-:150709341..150710995

Exon number

2

Exons

150709341..150710496,150710814..150710995

Genome context

Sequence
000001 CGATGACGTC GCCGGCCTCG TCCAGCTCCA TGTCGCCCTC CGTCGCCAGG ATGCGCTGCA CGGTCTGCAG GACGTTGGTT 000080
000081 GCCATGGTAA CATCGCCGCA GACAAACATG TGGCCCCGCT CGAGGCACAG CACGCGGTGC ACCTCCGCAG CCAGCTCCGT 000160
000161 CCTCAGGATG TCCTGCACGT AGGTTACCAT TGCGCCCTCA GGGTCTCACA CCTTGGGGTT GTCAGGTTCC CGGGAGAAGG 000240
000241 CGGTGAGGAC TCGGCCAAAC ACCCCGCGCT GCTGGGCGTT CTGCACCTCG TCGCGGTAGA GATGGTCAAG TTGGGAGCAT 000320
000321 CGGCAGCCGA ACACCAAAGT CATGGGAGTG GGCTGCAGCC CTGCAAGCAA CCCCGCGCTT GGGAAGGCTC TTCTCCGGGG 000400
000401 CACAGTGCTA GTGGGGCCTC CCCACAGGCC ACCGTCGCCC AGCCTGGCAG CCCAGCGTTT TGGGCTGAAA CCACCATTAC 000480
000481 TTTGGCTGTT TCATCTCTAA GAGAGTGTAG AATGCTTTCA CAGAGACCCT GCACAGCCCT GATTTACAGA GGGAAGGGAA 000560
000561 GCGCGGGTGA GGTGGTGGCC CCTGGTGGAG CTGCGCTAGA ATGCGCGGCT TCGGACTCAG AATTCCATGC CCTTTGCATT 000640
000641 GTGTGACATC GCAGTCCCCT TCCCCGCTCC CACTTCATAT TCTCCCATAC TTATAACTCT CCTCCCAGTC ACAGCCCTCT 000720
000721 TCTTTTGATT GACAGACCAC CCTGGGCACC CCATGCTCAA TATGAACACC TTGTAGCATC CTTAGGTCTT GGACAGACCT 000800
000801 CGGTCAGCTC TGGCACAGTC AAGAATCCAC CTTGGGCAGT TCTTCTTTGA GTCTTAGCCC TAATCCCTTT GAAAATTCTA 000880
000881 TTTTCCTTTG TCCTCAATCC AGTCAACACC TACTATGTAC CAGGCACCAG GAAGCCAGAA GCTCAGGGCC CAGCCCTTGC 000960
000961 CTTTGGTACC TGCCCTCCCC TTGGTCTCAT GAGCGTCTTT TCAGCTTTGT GGACTTTGTT TCCTGCCCTC TCTTTCCTAT 001040
001041 TTCCTGCCTT CCAGCCCCAC CCCTCTGTCC CTAGATTGTG TGACTCCCTT CAGGCAGTCC TTTAGTCCCC AGCCTCACCT 001120
001121 TTGCTCTCAA TGTCATGCAG CCGCTCCTGC CAGAATCCCC GGAAGGGGGC AATGCCAGTG CCTGGACCCA CCAGGATGCA 001200
001201 GGGCAAGCTG GGATCGGGTG GCAGCCGGAA GGAGGGAGCC CTGGCAGGAG AGACACTCCA TCAGGTCCCC TTTGCCTTTC 001280
001281 CTGCTCCACC ATTCTCACCA TGCAGGGTGG GTGGAGCAAG GAGGACCCAA GTTCTTCC
[back to top]

Predicted Small Protein

Name NONHSAT124163_smProtein_2:181
Length 60
Molecular weight 6370.3777
Aromaticity 0.0169491525424
Instability index 102.230508475
Isoelectric point 11.6050415039
Runs 8
Runs residual 0.00886331830197
Runs probability 0.0489423246776
Amino acid sequence MTSPASSSSMSPSVARMRCTVCRTLVAMVTSPQTNMWPRSRHSTRCTSAASSVLRMSCT
Secondary structure LLLLLLLLLLLHHHHEEEEEEEEEEEEEEELLLLLLLLLLLLLLEEEELLEEEEEEELL
PRMN -
PiMo -