NONHSAT129617

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT129617

Source

NONCODE4.0

Same with

,

Classification

sense

Length

560 nt

Genomic location

chr8+:144766622..144773644

Exon number

3

Exons

144766622..144766712,144772227..144772293,144773243..144773644

Genome context

Sequence
000001 GGATAACAAC TTCCGCTCGG GAAGTTTGTA AAAGTCTGGG CTACCGGCGC GGCGTAGTGG ATGCAGCATC CTAGTGGAGG 000080
000081 ACGCCCCTGT GATCTGCCCT CCTTGGCACT GTGCTTCCCC AGAGGGGTGG CCTCGCTGTT CCCATGGACA TGGCCCAGGA 000160
000161 GCCAGTGACC TTCAGGGACG TGGCCATCTA CTTCTCAAGG GAGGAGTGGG CGTGTCTGGA ACCCAGCCAG AGGGCCCTCT 000240
000241 ACCGGGACGT GATGCTGGAC AACTTCAGCA GTGTGGCTGC TCTGGGTGAG CACGGGCTGA GCGCAGCGTG AGCACAGGGT 000320
000321 GAGTGCTGGG AGAGCTCTGC CGCTGCCTCT GGGCCCAGCT CGTCCAGGAC AGTAGTGGGG CCTCCCAGCT GAGGGGGCTC 000400
000401 AGGAGCTAGA AGTTATTGGC TTATGTAGAC AGAGGGGCCC ACTCAGCGTT TCTCTCGGGC TCCCTGGAGG CAGCCTCATC 000480
000481 TTCCTTCCTC TGACCTTGCC AGGGCCTTCC GTGGGCCTTG GTGTCCAGGC CCCTCCCTTC CTGTCATCTC TGCTTTGGGG 000560
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Predicted Small Protein

Name NONHSAT129617_smProtein_143:310
Length 56
Molecular weight 6195.9028
Aromaticity 0.109090909091
Instability index 42.2945454545
Isoelectric point 4.39508056641
Runs 11
Runs residual 0.0484848484848
Runs probability 0.0244977597919
Amino acid sequence MDMAQEPVTFRDVAIYFSREEWACLEPSQRALYRDVMLDNFSSVAALGEHGLSAA
Secondary structure LLLLLLLLEEHHHEEEELLHHHHLLLHHHHHHHHHHHHLLLHHHHHHHHLLLLLL
PRMN -
PiMo -