NONHSAT130021

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT130021

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6602 nt

Genomic location

chr9+:3526119..3532720

Exon number

1

Exons

3526119..3532720

Genome context

Sequence
000001 GGGATTCCAC CGCAGGACTC CGAAGAGGTG CGCCTATGCT TGGCTGGGGC TGAGGTCACC AAGAGTCCTC TCGGAGGGAC 000080
000081 GTTACTACAC GCGCTGGCGA GGCCCAGGAG TCGTGGTGCG AGGGGTACTA TCTGTGAAAC GAGGGCTGCC TGTCCCAGCA 000160
000161 GCCAGCTTTG TACAGAGACG TCCCGGAGCC ACGAGAGAGT AACGGCTAAC CCGGGGGAGG GGGTGGCGAG GGTGATTCCA 000240
000241 GGCACTTTGT GAAGAAACGA GCTATGGCGA GGGAAGAATC CACTTTGAAG AGCGGCCCCC GCCCTGCCCG ATACGTTACT 000320
000321 TCCGGGGCGG GGCGGGCAGA GGGGCCCGGA TGTGCCGCCG CTTTTTAGTT TCTGAGGCGC CGGCGGTGTT CCTGGTAGCG 000400
000401 TCAGCCTCCT GGCTTTTCCT TTTCCTGGAC GCTTCAGGGC TCCGCGGCCT GCGCTAGACT GGAGGGTCCG CGTCACTCTC 000480
000481 GCCCTCCTGC TTTCCGCGCT CTCACCCGCT CCCGCCTCCT GAGGGCACGA CTTGTGGAGG AGCGCGGGCG GCGGGGCGTG 000560
000561 AGCGAGCTGC CTCTGCCGCC ATCTTAGAGA AGGCGAGCGT GGGGTGTGCG TGGGCGCGAG TCGGCCTCCC GCGGTGCCGC 000640
000641 CGCAGCGTGG CGCGGAGAGG TGAGGTCCAA GCGTGTCCGG CCCTCACTCC ATAACGAAAA AGCGAGGTCA TCACTCCCTA 000720
000721 TCTACAAGGG ATGGGAGTAA GTGCCTGTAG AGAGCAAGAA ATTGCCCTGC CCGGAGGCTG AGAAAGCGCA TTTGGCGGTT 000800
000801 CCCCTCGACG GAAGGCGTAG AGGGGCGGGG TAGCTTACAC CTGCCTGCGA TACCATCCTG TTAGTTTCTA GTTCTGTTAG 000880
000881 TTTCAGCCCT TAAGTGCTCA CCCCTCTTTA AAGACCGAAC TGGGAGTTGA GCTCAAGCCC GGATCCTGTT ACCTGCCGTG 000960
000961 CTCTCATCCC CCGTTACTCA GCCTACTGTA GCTGAGGGTC TTGCTGTTTG TGGCTGTATT GAGATAGACG AATGGCTTCC 001040
001041 GTCTGTGTTG AATGTTGTTA ACACAACCTG CCATCTCAAA CACCCGTTGA TAAGGCACAG CCTGTAATGC CTCATGGTTC 001120
001121 AAACAGACTC CTCCAATTCT CTGCAGACTC GAGTCCAGCA GGCACATGCC CCCAGGCCCT GCCAATACCC AAAATCTCCC 001200
001201 AACATTTGCC GCTAAGCTGC TTAACCAGGA CAATGacata gtagaagtag agccttagga agtcagttct cctcttgagg 001280
001281 cttaattttt gcacctgcaa gtaagggatt tgggcCGGCA TGCGTTCACC AGCGCTAAAA TAAtactgag ctcattctgt 001360
001361 gtcccagaac tggtgctaag tgttttacat acattatctc atgtaatccc aacaacacca gtgttaggta atattcgcat 001440
001441 ttgaggaaaa acaggccgag agTCCTAAAA GTCGGTGGTT TTAGTTTATG GCTGCGTGCC ATAGAATACA AGGTTACCTT 001520
001521 GTTTTAGGAA CCAGCTACTT TGGGTACGTT TTTAAAAGTA ATATTGTTGC CTTTGATAAT CTCATGAGTT AGAGATGTTC 001600
001601 TTACAATAAT AATGTGTTGC AGTAGTGAAC AGTGGTGAGC CTAGTGCTAA AGCTAAAAGG TTTCCTGACC CACTGTGGTA 001680
001681 GTAAGGGCTT CTAGTCAGAC AAATGATTGT GTGGTGACCA GTGTGGGTCC CATTTGACAT ACAGATGGGA AATGAGGTAT 001760
001761 ACGTTCCAGC TTTATGAAAA CTggtagtcg ttatgaatat tctctttatt atatttactg ataaagtcct cattcctata 001840
001841 atggtgtgta gggctgtatg ttcacactac atggctctct gaatagcttt gtttttttaa attccattgt ctgttatagt 001920
001921 ttgcctgtcc cgtctttcat tgtcagctgt tgctttttat ttttgtcagt gaacatagtt ctattatcct taccgccctt 002000
002001 ttaatttatt gctcttaatc tgcaggcaag aaaaccacat agtgaacctt gtgcaaaact gtatctcaag agtataaata 002080
002081 ggtacttcga gggactatta aaaaataagt gcaacccttg tgctaggaca ttatagaatc agttttaagc tgcttaaatt 002160
002161 tttttttttt tttttttttt ttttttttGC CTTACAGATT TGGTCTTTTC CAGAGTTAGG AATAGATAAA TTTCCTGAAG 002240
002241 TTAATTCTTG AAAATTTAGA ATTTAGAATA TTTTCCCATG TTTTAGGATA CTTGATGATG ATACAATTCT AACCATATTG 002320
002321 AGGTTAATAT TTGAAATGTT AGTGTTACTG CCtgataggg tttggctttg tgtccccacc caactctcat gtgaaatcgt 002400
002401 aatccgaaag tgttgaagga ggggccctgt gggagatgat tggatcctgg gggcagtttc tgatggttta gcaccatccc 002480
002481 actagtgctg tttcaagagt gacttctcac gagatctgct tgtttaaaaa tatttaccac tacccctctc tcacctgcca 002560
002561 caatgtgaag aaagtccttg tacccttcgc cttccgccat aatggtaagt ttccgtgaga cctcccagtc atgcttcctg 002640
002641 ttaagcctgc agaactgtga gtcagttaaa cctcttttct tcataaatta cccagtctcc ggcagttctt tatagcagtg 002720
002721 tgaaaaggta caaatacaCC ACCACACTGA ATCAGATGAC CAAGATACCA GTTCAAGCTA TAGAATCGAA AATACGGATT 002800
002801 TTATATGCAT GTATTGTTTA ATACTGTAAT TAGTTACAAA AGAACCCAGA AACCTTTTAA CCCATAGTTA TTGCTTGTAG 002880
002881 GATTTTTTTT AGCCATTTTT TAAAGCTGCA TAGATGCATC TTCACATATG TTGCATGTAT GTTTCAGAAA TAAATTATTT 002960
002961 GCTAAGAAGT CACAGAAAAG ACCCAGTATT GGACCACTCT AACAGTTATC ACCTATTATA GTGCAAAACA CACTGTGTGA 003040
003041 TCAATAAAAA AAGGTACATA ACCAAGCTAA AATTGGGCAG ACATAGTTCC TGAATGTAAA ATGTTCAACA TTATCTATTA 003120
003121 ATTTAGAATG TTGTGTTTTA ACTTGGATTG TTTTTTTCTC TCCGATCAGA ATGATTGGAA GAGACATGGA ATAACACATT 003200
003201 TGTATCTGAA CTACTTGAAG AAAAATCTGA AGCCCTGATG ATATATATAG ATTGTGTATT TCATAAGTTA CTTTAACACA 003280
003281 TTCGTAGTGG TAGATTTCTG TATTATCTAT TAGAGTGTTT TTGCCTATTC ATATCTACTC CATATTCAAG GACTAATAAG 003360
003361 TTATTTCATT ATTATACTTT AAAAAAGAAA GGATGCATAT GAAAAGATAA AATAGTGCTA TGTGATAGGC TTGCTTCTGA 003440
003441 AAAATAGTAT GAGAGTTTGA AAAGTAATGT ATGCTGTGGC ACCTTATTGT TGAATTTGTG GTGAATCTTT TTATGAGAGA 003520
003521 AATCACACCT GTTTTAAATT TTTTCATTTG ATTATATCCT ATTTTCTTCA ATTGAGAGAG AGATGTAGAG TCTTGGGTTC 003600
003601 TCTTATATAA AATGAATGGT TTCATTTGTA CCAATATTTA TTGAGCACTT ATGTGGAATA CTGGATAATT TTATTACTCG 003680
003681 ATTGCTAATT CCCTTTACTA GATCTGAAAT TCTGTGGATA TGTGATAATT ATTTAAAAAT GATAAGAGAG TGATAGGGGC 003760
003761 CAAGGTAATT CAAAACTGAA CATAATTTGC CACTATTCTC TGGAGCACCC TCAAGCCTCC CTATCCCCAC CTAAAGTATG 003840
003841 ATTTGGTTTT GAAAACAGTG CAATAATTTT TTCTGGTAGA TTTGTCTTTC TGTGTTTTCT TTAAGTAATA CAAACCAGCT 003920
003921 GATTACTCGG CAGTTCTGAA GAGTGTGTGT GGCTATGTGT ACACACGTTT GTGTGCATGT GTATGTCTTG GAATTACATT 004000
004001 TTTACTCCAG CACAGAAAGA TGATTATAGA ATCATAAGTT GACTACCTTT GCTTAACACC AAATTACCTT TTGATGTACA 004080
004081 CATGCAGCTT TAAAAAAAAA AGTCTGGggc cgggcgtggt ggctcacgcc tttaatctca acactttggg aggccgagcg 004160
004161 ggtggatcac ctgacatcgg gagttcgaga ccagcctgac caacatggag ttaccccatc tctactaaaa atacaaaatt 004240
004241 agctgggtgt ggtggcacat acctgtaatc ccagctactt gggaagctga ggcaggagaa tcgcttgaac ctgggaggca 004320
004321 gaggttgcgg tgggccgaga tcgcaccatt gcactccacc ctgggcaaca agagcaaaac tcggtctcaa aaaaaaaaaa 004400
004401 aTAGTctgga aacaattcaa atgtatatca ataggaggat gggaagacaa attgtgggcc cagcacaatg acttaacacc 004480
004481 tgtaatccca acactctggg aggccaagcc atgaggatca ctggaggcca ggagtttgag actagcctga gcaacatagc 004560
004561 gagactctgt ctttacaaaa aaaaattaaa acttagctga gcatgttggc acatgcctgg agtcccagct acttgggagg 004640
004641 ctgaggcaag agaattgcat gaatccagga gttcaaggtt gcagtgagcc gtgatcacac cactgtactt cagcctgggt 004720
004721 gagagcaaga ccttgtcttt aaaaagtaaa agagtaaaac aaattgtgat acagtcatac gatggagtat tattgagcaa 004800
004801 gtcaaaggaa aggactgctg atacaacacg gacaaatctc aaaaacattg catttggcaa aagaagccag acacagagta 004880
004881 catagcatat gaatccattt atataaaatt taagaacagg aaaaagtaat ctgtgtttag tatcttctta tggcagaggc 004960
004961 agtaggttgg gattttagtg gaaaggatta tgagggaaca tggtaggatg gtgaaaatgt tctgcactgt ctcagctgca 005040
005041 ctaatgacat atagctatta aaatctatta attaaaacaa aattcatttc cactgtcaca ttagctacat tttaaatgtt 005120
005121 caatagccac atgtggctac tgcctactaa gttggacagt gcaaatacag acttctgtta tctcagaagt tctactagag 005200
005201 agttctAGTC TAGACCTTGT TTTATGCACA TGTTTACATT TTTCAAAATT GTAATTAATA TGCATTGTAT GCCAGTAATA 005280
005281 CCTGCCCCCA AACCCTATAA ATCATTAATA GAATTTTTAT TACTCTATTT TAATCTACTA ATTAGCCCAT GTTTTCCATA 005360
005361 ATATTTTTGT TCAACCCTGG GGAGAAAGGA TAAATAGTAA AATTCTTGGC AAATTTTCAA ATATGTAATT GTGACATACA 005440
005441 ATAGATAGCA TTGATTTTCC GCTCCAAAAA ATGAGTTCTG CTGCTTTATA ATTTTGAATG CATCTAGAAA CAAGAAATTT 005520
005521 CTTTTGAGGG CTTAAAGTGA ACTCTAGATG AATACAGAAA AAATTTTTTC TATTGGAATC AAGTATCTTA AACGTGGCGA 005600
005601 TCATACAACC TTCTTCTAAG GTAACACTTA AGAGCGTTTT GGGAGATTTT GGTGCTAGCT CTATGACTAG GTTTAGAAAG 005680
005681 TCAAATAAGC TCGGTAGGTA ACACTTCAGA CTCAAGCCTT TTGGAAGTAG AAGAAAACTA AGTTTGTAAG TGAAGGATAA 005760
005761 AAAGACCTGA ATGATCTCAA TTCTAAAATT CTGATTTTAA TGGATTTTAA GAGATGGAAT ACCAGGTGAA TTGATTCAAA 005840
005841 ATATTAAATA TATGTGTTTA TATAGTACTT CAGTGAAATT AAGAAAAATT TTTGGTGGAG TAAGTACCTT AATAATGTTA 005920
005921 ATAAATATTT CTACCAGTGT TTTTTAAGAC CTTTGTGAAC CCCAAGTAGA TTTTTACAAG ACAATGAACT TTAACTGTTA 006000
006001 AAGATTAATT ATTATAAATG AATCAGCAGT TCATGTCAAT AATATGTGCT GGAAAGTATT TTCTCAATTA TTGTCAATTA 006080
006081 TATATAAAAA ATGATTTTAT TTGATCCAAA TTCTTTAACT GCCAAATTCT TGTTTTCTTt ctctctctct ctctccccct 006160
006161 ccctctctct ccctctccct ctctctccct ctctctctgc cccctccctc tctccccacc tttccctctc cctctgcctc 006240
006241 tctctcttcc tctccctctc cctctccact tcctccctcc ccttcccttc ctcccttcct ctacctTTTT TTTTTCTTAT 006320
006321 AATGTAATAT GTAGTCTGGA GAAAACATCT CCCAAGTTCT GTTGGGCCAT TCTCCCTATT GGAAGTATAC TAATAGTATC 006400
006401 TGCTCACTGG AACATGCCAT ATATGTCACC TGCCCCACAT ACTGATATCA CAATAATATG TAAAACCTTC ATTTAAATTG 006480
006481 TTTTTGAATG TGTATATCAA TTGTTACAGC ATATGACTGA ACTTTTTTCA TCCTTAAAAA TTTTTTTAAG CAATATGACA 006560
006561 CAACCACTAA TGAAGAAAAA TAAAGATTAC TGATTGACAT TA
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Predicted Small Protein

Name NONHSAT130021_smProtein_1106:1240
Length 45
Molecular weight 4704.4345
Aromaticity 0.0227272727273
Instability index 72.7909090909
Isoelectric point 8.94049072266
Runs 5
Runs residual 0.0494652406417
Runs probability 0.041688747571
Amino acid sequence MPHGSNRLLQFSADSSPAGTCPQALPIPKISQHLPLSCLTRTMT
Secondary structure LLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLLL
PRMN -
PiMo -