NONHSAT132831
Revision as of 22:29, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT132831 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
625 nt |
Genomic location |
chr9-:88938543..88939568 |
Exon number |
2 |
Exons |
88938543..88938875,88939277..88939568 |
Genome context |
|
Sequence |
000001 AAATGGAATT CTCTTATTTT TGCTTGATTT TTTTTTCAAG CTTTATGTTG CATAAGAGGG TTTTTTGCAT TTTGCATAAA 000080
000081 TTCTGTGTGC AGTCATGGGG ATCTCACATT TTTAAACCCT CCCCTGCAGT TTCTGTGGCT CAGCTCTTCT GGCCAATTGC 000160 000161 CTAACCTGCT GGAGTTCTAG GGGAGGAGAA AAGATTGAGA GAAGTGGTGT CTCCTCCTGG TGCCTCCCTC TCGCCCCTGA 000240 000241 AATTCAGTCC AGCCAATTCA GTGATGGGGC TTCCCAGGGC AGAAGAGTGG AGATCCCTAC TCTGTTAAAA GAAATGTGGC 000320 000321 AAGAACCCTA AATAGTCAAC CTGTGTTTGA ATATATACTT CATTGTTTAA GGACAACATA CAAGTATTTT GCTCTTCCAC 000400 000401 ACAAAATTAC AAAATCCAGC CTTCTAAAGC CTCTGAATGC AATTACATGT ATTTCAGAAC ATTCTAAAGA AGTAATAAAT 000480 000481 CATCATCCAG ATGTACAAAC AAAAGATGAT AAGCTCAAAA ACTCAGTTTT GGCCCAAGGT CCTGGTGCTA CCAGTTCAGC 000560 000561 TGCAAATACC TGTAAGGTAC AGCCACTTAC TCTTAAAGAG ACTGCTGAAA GTTTTGGAAG CCCAC |
Predicted Small Protein
Name | NONHSAT132831_smProtein_2:163 |
Length | 54 |
Molecular weight | 6260.4426 |
Aromaticity | 0.22641509434 |
Instability index | 60.3018867925 |
Isoelectric point | 9.05792236328 |
Runs | 8 |
Runs residual | 0.00931891394386 |
Runs probability | 0.0430908850027 |
Amino acid sequence | MEFSYFCLIFFSSFMLHKRVFCILHKFCVQSWGSHIFKPSPAVSVAQLFWPIA |
Secondary structure | LLEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHLLLEELLLLLLLHHHHHHLLL |
PRMN | LLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHLL |
PiMo | oooooTTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTTTTTTToo |