NONHSAT134505
Revision as of 22:35, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT134505 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
549 nt |
Genomic location |
chr9-:123151474..123163297 |
Exon number |
4 |
Exons |
123151474..123151570,123152019..123152065,123156790..123156916,123163020..123163297 |
Genome context |
|
Sequence |
000001 ATGTGGTACC AGGCTTTCGC TCAGCGTGTG AAACAGAAGC CCTACAGTCT GGAGATTTAT ACTGCATGTT AAGGCTTGCT 000080
000081 TGTCTAAAAT CTTTTTCAAG ACTGCACGTA ACAGCCTTCA TATCCCCCGT GTAGGGTCCA CACCCAGCAC CACTGAGCAA 000160 000161 GTTTGTGAGC AGTGTGAGCA CGGCCAAGCT GACCCTGGAA GAGGCCTACA GGCGGCTGAA GCTTCTCTGG AGAGTCTCAC 000240 000241 TCCCCGAGGA TGGCCAGTGC CCCCTTCACT GTGAGCAGAT TGGAGAAATG AAGGCAGAGG TCACCAAACT ACATAAAAAA 000320 000321 TTGTTTGAAC AAGAAAAGAA GTTGCAAAAC ACCATGAAGC TTTTGCAGCT GAGCAAGCGC CAGGAAAAAG TCATCTTTGA 000400 000401 TCAATTGGTC GTAACCCACA AAATCCTTCG GAAGGCCAGA GGAAACCTGG AGCTTAGGCC TGGGGGAGCC CATCCAGGAA 000480 000481 CATGCAGTCC CAGCAGACCA GGCTCCTGAG AAGAACTTTC AGCCAATAAA GCTTGTGCTT CCCCCACCG |
Predicted Small Protein
Name | NONHSAT134505_smProtein_287:508 |
Length | 74 |
Molecular weight | 8303.7391 |
Aromaticity | 0.027397260274 |
Instability index | 51.4931506849 |
Isoelectric point | 10.4088745117 |
Runs | 9 |
Runs residual | 0.0208572691118 |
Runs probability | 0.0226402873462 |
Amino acid sequence | MKAEVTKLHKKLFEQEKKLQNTMKLLQLSKRQEKVIFDQLVVTHKILRKARGNLELRPGG AHPGTCSPSRPGS |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHEEHHHHHHHHLLLLEELLLL LLLLLLLLLLLLL |
PRMN | - |
PiMo | - |