NONHSAT141425

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT141425

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

980 nt

Genomic location

chr16-:27055711..27059762

Exon number

3

Exons

27055711..27055835,27056855..27056940,27058994..27059762

Genome context

Sequence
000001 ggagcgttta ggagtctcaa catgtaaagg gtggttggag tttcaaagag ctgagaaaga acttgacgag ggatggcaga 000080
000081 gaggtacgaa gttcaggaaa gtgatgtcgt gaagccaagg gagagagatg tgagaagaga atggcaacat gttgaaagtt 000160
000161 gcacggaggt caaataaaag ggaagacacc tccatacatt taggaaaaag ctggaggcag aaacgagact gtagtgcgtt 000240
000241 ggagagtgaa tgggagagag atgaacatag tgtatatgct ggcctaagaa aggcaagcaa gagattgggc aggacccaga 000320
000321 ggagatgttg gattgtggga gGTgtctgca ttccttcaaa agcagacctt gaaacagaat tgagtgcaag tggtttattt 000400
000401 tggagatgat cccaggaaac accaatatgg gtggcgggtg aagaaaggag acatcagtaa agaatatttc agcaagcaag 000480
000481 atgaatgtgg gaatatggag cttaacttta ttgggtaacc ctggaagaca gtatggactg tgtattcaaa gttaattccc 000560
000561 cattaacttt ggggagctgg gatatattta tccaccaatt ttagtcattg gttgagcttc cgttccttgg ggattgggga 000640
000641 agcattaatt tcccaggcac ctttagcagg ccatgtgcat ggggaaagga ggctctggca gccagataaa gtcctcacgt 000720
000721 aaaaagacag gagatggcag ttggaagttg gatgaaagtg atgaaaatga cactgaagaa tgagctgtag aaggaacaga 000800
000801 gagttagaag ctagaaaagt acatggagaa ccatacaact gtggtgtcat aaaagACTTA TCTTCTGCTG TGTTACCCTG 000880
000881 GTTGACTCCA GTTTGGCTTC TACTCCATGG AAGAGGTTTT ACATTTCATC TGGCCCTGTG AATGTGGACT CCGTTTCTCC 000960
000961 CCTCCCTGTG CTGACATTTC
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Predicted Small Protein

Name NONHSAT141425_smProtein_779:940
Length 54
Molecular weight 6089.0875
Aromaticity 0.0943396226415
Instability index 47.6811320755
Isoelectric point 9.38067626953
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0700896975407
Amino acid sequence MSCRRNRELEARKVHGEPYNCGVIKDLSSAVLPWLTPVWLLLHGRGFTFHLAL
Secondary structure LLLLLLHHHHHHHHLLLLLLLEEELLLLLLLLLLLLHHHHHHLLLLLEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooo