NONHSAT141707
Revision as of 23:07, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...")
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT141707 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
739 nt |
Genomic location |
chr16-:30125523..30128188 |
Exon number |
2 |
Exons |
30125523..30126029,30127957..30128188 |
Genome context |
|
Sequence |
000001 GCTGGGGGCA GGGGAGCAGG GGGGCACGTA GGCATCCCCC ATGCCAGGCC TGAGCCTTGC TGTCTCTACC ACCCCAGCCA 000080
000081 GTGGCCGAGG AGCCCTTCAC CTTCGCCATG GAGCTGGATG ACCTACCTAA GGAGCGGCTG AAGGAGCTCA TCTTCCAGGA 000160 000161 GACAGCACGC TTCCAGCCCG GAGTGCTGGA GGCCCCCTAG CCCAGACAGA CATCTCTGCA CCCTGGGGCC TGGACCTGCC 000240 000241 TCCTGCCTGC CCCTCTCCCG CCAGACTGTT AGAAAATGGA CACTGTGCCC AGCCCGGACC TTGGCAGCCC AGGCCGGGGT 000320 000321 GGAGCATGGG CCTGGCCACC TCTCTCCTTT GCTGAGGCCT CCAGCTTCAG GCAGGCCAAG GCCTTCTCCT CCCCACCCGC 000400 000401 CCTCCCCACG GGGCCTCGGG ACCTCAGGTG GCCCCAGTTC AATCTCCCGC TGCTGCTGCT GCGCCCTTAC CTTCCCCAGC 000480 000481 GTCCCAGTCT CTGGCAGTTC TGGAATGGAA GGGTTCTGGC TGCCCCAACC TGCTGAAGGG CAGAGGTGGA GGGTGGGGGG 000560 000561 CGCTGAGTAG GGACTCAGGG CCATGCCTGC CCCCCTCATC TCATTCAAAC CCCACCCTAG TTTCCCTGAA GGAACATTCC 000640 000641 TTAGTCTCAA GGGCTAGCAT CCCTGAGGAG CCAGGCCGGG CCGAATCCCC TCCCTGTCAA AGCTGTCACT TCGCGTGCCC 000720 000721 TCGCTGCTTC TGTGTGTGG |
Predicted Small Protein
Name | NONHSAT141707_smProtein_275:535 |
Length | 87 |
Molecular weight | 9513.8365 |
Aromaticity | 0.127906976744 |
Instability index | 68.3348837209 |
Isoelectric point | 10.7129516602 |
Runs | 9 |
Runs residual | 0.0349704963554 |
Runs probability | 0.0272036742625 |
Amino acid sequence | MDTVPSPDLGSPGRGGAWAWPPLSFAEASSFRQAKAFSSPPALPTGPRDLRWPQFNLPLL LLRPYLPQRPSLWQFWNGRVLAAPTC |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLHH HLLLLLLLLLLHHHHLLLEEELLLLL |
PRMN | - |
PiMo | - |