NONHSAT141967
Revision as of 23:09, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141967 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
913 nt |
Genomic location |
chr16-:31812906..31813818 |
Exon number |
1 |
Exons |
31812906..31813818 |
Genome context |
|
Sequence |
000001 TCAACGATAC TCAACCATGA TGGATTGTTT AGCAGAAGAC AGACTGACAC ATTTGACTCT GTAAATTCTG GGAAACTCTC 000080
000081 TTCTTTATCA TTATGTCTCC CTTTTCCTCA CTGGGTGCAG GTTAAGGTGC ACAGATTTGA TTCTCATGCA CCTGATCATA 000160 000161 GCCAACTCCT TGGTCATTCC CTCTAAAGAA ATCTGGCAGA CAGTGACATC TTTGGTTTGA ACAACTTCAA TGATTTTTCA 000240 000241 TGTGAACTTC TATTCTTCCT TCAGAGACTG GGCAGGGGTG TTCCTCCTGG CAGCACTTGC TGCCTGAGTG TCTTCCAGGC 000320 000321 CATCGCTATT TCCCCAGGGA CTCCAGTAGG GCAGAGCTCA GAATAATAGT TCCCGAGCTC ATTGGACACT TGATTCTCTC 000400 000401 ATGCTGGATC CTAAACACAC TAGTAAATAA TTTTCCTCTT TATGCGTCTG GCTATAACTC AATGCAGCCA TCACAAGGAA 000480 000481 AATAGATAAT GGATACTGTT ATGCCATGAT TCGTGTCAAA ATCTCACACT CCCTGTGTGC AGTGCTGTTC TGATTCCCTG 000560 000561 ATGTTTTGGA TTTGGGAATT ATGGCTTGGG CCAGAGGCTC CATGGTTTTC ATCCTGCGCC GGCACAAGCT GCAGGTCCAA 000640 000641 CACACTCATG GGACCCACCT GCCGTCCAGG TCCTCCCCTG AGTCCAGAGT CACCTAAACC ATACTGGTCC TGGGGAGCAT 000720 000721 TTATGTATGC TTTTACATCG TCTTTTCCTT TTGTCAATTT TTGGCTCCTT TTATTCCTCT TAGGCGGTGG CTGGTGAGCA 000800 000801 TTTCTGCTCA CAATGGTGTG TGTTCCCCAA CTCTCAGCCT TTTTGTTTCC ATCAGCTGTG ACTCTGGTGT CTCCAGGCTC 000880 000881 TGCTTTGCCT GACACAGAAT ACAAAATCCG CTG |
Predicted Small Protein
Name | NONHSAT141967_smProtein_560:796 |
Length | 79 |
Molecular weight | 8901.2312 |
Aromaticity | 0.230769230769 |
Instability index | 67.1717948718 |
Isoelectric point | 5.97845458984 |
Runs | 7 |
Runs residual | 0.0439337085679 |
Runs probability | 0.0585711762181 |
Amino acid sequence | MFWIWELWLGPEAPWFSSCAGTSCRSNTLMGPTCRPGPPLSPESPKPYWSWGAFMYAFTS SFPFVNFWLLLFLLGGGW |
Secondary structure | LEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHL LLHHHHHHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHH HHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTT TTTTTTTTTTTTTooooo |