NONHSAT143569
Revision as of 23:16, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143569 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1038 nt |
Genomic location |
chr16+:72463032..72464069 |
Exon number |
1 |
Exons |
72463032..72464069 |
Genome context |
|
Sequence |
000001 GAATATGCAG ATGAGGCCTG ATGTGATTAC ACTGTACAAT TACTCCTATC CATGGTGGTG TCAGGGGCTG CTAGGGAGAC 000080
000081 AGAGAGTCAG ACAGCCTCCA AGCCAATACA GAGTTTTGTT TTCGGTATTT TTCCTATCTC CTTGGCACTG CGGCACATGC 000160 000161 AGATGTCGCT GTTGTTCTTT ATAAAGCCCT AATGTATGCA AAAGCATAAC GATTTGGTTT GGACGCAAAG CATCAACGAA 000240 000241 ATATTATGGA TGTCTTCAAG AAAGGGGGAG AGAAAATCCT GACTGAAGGA ATGTCCACAT AAATTATTTT TATTTAAATG 000320 000321 AATTCAAAGG ATGGGATGAG GGCAAGTCAG ACGGAGTCGC GTGGAAAACA TGAATAATAT TAATATGCAT AAAGAATTCT 000400 000401 CACCAACGAG GAGAAGCTCC TCACTACAGC TCTTGGGACA AACAGGTTCA TTAGGAAACA GCTCAGAGCG ACTACAGCAT 000480 000481 TTTGCTATTT CAATTTTTTC CCTTATTTTA AATGAAGAGT CAGACAGATG TGTTTTCTTT GCATGGCAGC ATTGAGATGG 000560 000561 ATCCAATCTG CGAAATTTGC TGCCCAAATA GCATTTCTAA TGGAAACTGG AACTAAACAA GGGCACGGAT ATGGGAGGGA 000640 000641 GGGGAGAAGA GAGAATACAC GAAGAAGAGT ATATTCAGAG CCACTGCATG GCATTTTGAG TACAGGAGGT TTTCAGGAAC 000720 000721 GATCTTTGCT TCATTAGTCT CCCCTGTGGG CTCCTGATGT AGGGAGCTAT CAGGGTATAC CAAGATGAGC ACTGAGACAG 000800 000801 GCCTTTCTAG GTCTGAGGCT GAGGAAAGCA GCGGCAACTT GGTGCCTGTC CCCCAGAGCT GTCTACAGTT CAGAAGCCAA 000880 000881 AAGCACAGCT ACTTCTAATT TGGGGATGCA GTAGAGTGCC TACTGATCCA GGTATTTGTG AAAGATGGAA TTCTTGGTGC 000960 000961 TATCATAGTA TACATTGCTA AAGAGCAGAT GAAATCGGCT GCTTAAGGAG GCCTGATAAT ATTTATGTTG GTTAATTC |
Predicted Small Protein
Name | NONHSAT143569_smProtein_527:736 |
Length | 70 |
Molecular weight | 7872.0029 |
Aromaticity | 0.101449275362 |
Instability index | 68.7695652174 |
Isoelectric point | 10.036315918 |
Runs | 9 |
Runs residual | 0.0088965418281 |
Runs probability | 0.0411489921295 |
Amino acid sequence | MCFLCMAALRWIQSAKFAAQIAFLMETGTKQGHGYGREGRRENTRRRVYSEPLHGILSTG GFQERSLLH |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLEEEEELLLLLEELLL LEEELLLLL |
PRMN | - |
PiMo | - |