NONHSAT055643

Same as lnc-SLC39A11-3:4

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-SLC39A11-3:4
Source	LNCipedia2.1
Same with	NONHSAT055643
Classification	intergenic
Length	5836 nt
Genomic location	chr17-:70027567..70036353
Exon number	2
Exons	70027567..70030479,70033431..70036353
Genome context
Sequence	000001 AGCAACCTTT CAGTAGACTG AGGCTTTTAC ACATATTTAG CCTTCAAAAT AACCCTATAA GACACACAGT TATTGTCCCC 000080 000081 ACTTTACAGA TGAGCATATT TAAGCTTGAA GGAACTAGCT CCAATTGTTT TGACCTTTGA ATGCTCTCAG GTTTCTTTGT 000160 000161 TAAGATCTAT TTGGTTCTAT GGCCATAGCA GAACATTTAG GTTTGTTCAG TGGCTGGGAA TTGGTTCCCT CAAATGTCAC 000240 000241 CATGGAAGTT ATTCAGCTTA AGCTGACCCA GTCCCTCTCC CATTCTGCTG ACTAACAGCT GGTGGCTGGA GCTGCGGGGA 000320 000321 GAAGATATTA TATAATGTCT ACAAAAGTAA CGAAAAGTTG ATTTAACTGC TAAGATAAGC AACCAGCAAG ATAGAATTTA 000400 000401 CACTGATTTA AAAATATGTT TGCTGAGCAT AATATCTAGA CTGCCCCCCA CACCCTCTGT TCTTTATTCC TGACTTCTGA 000480 000481 TAGTGCTGTG GCATGTGCTG TTGAGAAATC AGAGGTCTCA ATGCCATGAG AATCAGACAA GAGGCAATCT CCACACTGCA 000560 000561 ACCATACACA GAATTAGGTC ATTGAATTCC AAGAGTATTG GGTCCTTTGG AAGACAAACT CTGTTATTCT TTTTTTTTTT 000640 000641 TTTTCCTTTT TGATAAATGC CTACCTCCTT TTAAAAATAT TTCCGACAGG AAAATCAGAC TTTTTCTTTT GAATCATTTC 000720 000721 TCTGCATCTG GGTTGGATGT TGACTACTTC TTCTCTTTCC TCTGCTCTTT TTCTATCCTT TTCGCTATTT TTTTCAACCT 000800 000801 TTTTCACAGT TGTTTCTATT TCCTTCTTCT CCCCTCTCCT TATAATAGCT CCCACTGTGC ACCAGGCAAA TCAGTATGGT 000880 000881 TGGGTCAATA AGGGCAAAGA CCTCTTTAGA GTGGTGGGGA GGCACCAACT TTGAAGTCTT TGGTAAATGA ATAAAAACCC 000960 000961 CCTGAAAGTT TTTGAAACCT AAGCTGGGTA CAACAGGGTA CAAATAGAAA TAATTTTTCC CCTCACAATT TTCAAAAACT 001040 001041 TTCTATCCTA ACCAGCTATC TGCCTTGTCC TACTGCTCAT GCACATTTAA ATGTTATTAT CACTTCAACT AACTGATTTC 001120 001121 AATGAAACTC AAAATACATG TTAATTTAAC AAACATTGAT TAATCATGTT TTATGGGTCA GGTTGTATAT TATGGGCTGT 001200 001201 GAGAGGTAGC AGGATGAATA TGTTGTAACC TCTGCCTTGT AGGAACTTTA CACTTTGGTG GGGAAAATGA GTAAATAGAC 001280 001281 ATCCAGTTGT CACTATAGGT TGAAGTATTC ATTATCAATT GCTGTAGAAC AAATCACCCC AAAAACTTTG TGGCTTAAGA 001360 001361 TAACACACAT TTATCATCAC ACAGTTTCTG CAAGTCAGGA ATCCAGATAT GGTTTTACTT AGTCTTCTCA TTTCAAGGTT 001440 001441 TCTCATAAGC CTGCAATCAA GGTGTTAGTA TAATATCTGT GGTCTTATCT GAAACCTCAA CTAGAGAAAG GTTCACTTCT 001520 001521 AACCTAACCC ATATGATTGT TGGGAGTATT CAGTTACTTG ACAATTGTTG GAAGGAAGGT CTCAGTTTCT CACCAGCCAT 001600 001601 TGACTGGAGG CCACCCTCAT TTCCTTGCCA CATGGGCCTC TCCAACACTG CAGCTTGCTT CTTCAAAGCA TACAAGCTGA 001680 001681 GAAGGCAATT GAGAGAGGCT GTGAACAAAA CAAAAGTTAC AGCTTTGTGT GAACTAATTT TGGAAATGAC AGCTCATCAC 001760 001761 TTGTGTGTAT TCAATGGATT AGAAGAAAAC CACTAAGTCC AGCTCACATT GAAGAAGAGA GTATTCCATC AGGGCTTGAA 001840 001841 TACCAGGAGG GGAGATGATT AGGAGCTGTC TCAGAACTGC CTACCTATAA GGTTTAAGAG ATTGTTAAAC AGAGGCTCAA 001920 001921 AAAGCTGTCG TTTGCTAGGC GCACTGGCTC ATGCCTGTAA TCCCAGGACT TTGGGAGGCC GACGTGGGCA GATCACGAGG 002000 002001 TCAAGAGATC GAGACCATCC TGGTCAACAT GGTGAAACCC TGTCTCTACT AAAAATACAA AAATTAGCTG GGCATGATGG 002080 002081 TGTGTGCCCG TAGTCCCAGC AACTCAGGAC GCTGAGGCAG GAGAATCTCT TGAACCCAGG AGGCGGAGGT TGCAGTGAGC 002160 002161 CAAGTTCGTG CCATTGTATT CTAGCCTGGC AACAGAGTGA GACTCCATCT AAAAAATAAA TAAGTAAATA AAAAGAAGCT 002240 002241 GTGATTGCGT GAAAGCAGGG AGTGATAAAG AAATCTTATT TTTAAAAGGA GATTGTTTTA CTCTGCTGAT ACTAGACTTC 002320 002321 TCTAGAAGGT TTGCATCTAC CCAGTGATTT GTGGAATAAT CCCAGACCTC CAGAATTTGC GATTGGAGTG TTGGTGGCTA 002400 002401 ACTACTTAAG GTATTATATC TCTAGTCATG ATGAAACATG AAGCCGCAAC AGTGTCCCCA AAGCCACATT TATGGTTGTT 002480 002481 CTATTCAGGC TTTGTCTCAA GGAATTTTTT GTAATCAAAA AGTCATTCAG TTGTTTATAG TTGTTATTAC AGTTGACCCT 002560 002561 TAAACAATGC AGGGACTAGG GGCCCCAACA CCCCATGCAG TCAAAAATTG GCATGTAACT TTTGACCCCC CAAAAACTTA 002640 002641 ACTACTAATA GGCTACTGTC TTATTGGTAA CAGAAACAGT TGATTATACA AGTTTTGTAC ATTATATGTA TTATACACTG 002720 002721 TATTCTTACA ATAGACTTGA GAAATGTTAT TAAGAAAATC ATAAAGAAGA GAAAATATAT TTATTATTCA TTAAGTGGAA 002800 002801 GCAGAACATC ATTAATGGTC TTCATCCTTA TTGTCTTCAC ATTGAGTAGG CTGAGGAGGA AGAGGAAGAG GAGGGGTTGG 002880 002881 TCTTGCTGTC TCAAGAGTAG CAGAAGCAGA AGAAAATCCA AGTTGGTCAA AGGAAGAGGA GGATCAATGG CCTTTTTTCC 002960 002961 TCCCCCCAAC CTTTTTTTTT TTTTTTTTTT TTAAACAAAG AAGCAAAGTG AGAACATTAA GCCCGAAAGA GAACTGTGTT 003040 003041 CATTGCAGGA CTTTTTGAGG TCTGGTTAAG CCATTTATAT AAAGAAATTA CACAGTTCCT CTTTGGTAAC CTCAATCCTG 003120 003121 AAAGTTAGTG TGACAGGCCT ACAGCTTTTT GTTCTCTTCA TCACTCCAGA AGTTGCAGAC TGCGCTCAGC AAGACCTCAC 003200 003201 AACATGGAGG AAAATTAAAG AGATAAGTGG TCCATGGAGT ATCCCCTTAC CCCACCATAA ATTGGCATAA TTTTGTGCAC 003280 003281 AATCCAGGGA GAAGAAAAAG AAGACCAGAA GCTTGCAAAC CATTCGAGAG AAGGAAGGGA GCTTTGTCAT GTTGCCATCT 003360 003361 GAGGCAAGTA TACTTGGGAT GGGACAGGCA AGCTGAATAG GAATGAAAAA GAGCACTTGG TCAACAAACA CACAAATCTA 003440 003441 TTAAGGTTTT TCAAGAAAGA GAGACAAAAT TCAGCATGGT TCACCAAAAA GAAAAAGAAA AGAAAAAAAT TATGTCCAGA 003520 003521 ACTCTCCCAA TTGTCCTGCT AAATACACAC ACACACACAC ACACACACAC ACACACCAGC CTATAATCCC CCCTACCCCG 003600 003601 CCCCCCACCT CATGCCCCTA TCCTGTTGAT CTTTCCTCAC TTAAAAATTA TCAGAAAAGA ATTTATTCAT TTGGGAGGAT 003680 003681 TCCAGGCACT ACATTTATGT TGCGTTCAGA TGAAATGGGA TCCAGACTTT TCAAACCGTA CTGTTTTACA GATAAAACAC 003760 003761 AAAGGCAGAA CTTCATTATC TGGAGACACT GCCCTTTCTT TTTTCTCCTG CCTTTTGTTT CTGAGCAATT TTAAGCTTGT 003840 003841 TTGGAAAGTA TCATAACAGG GGCAGAGCGT TTTTTACCAC ATCTATTTCA GGAGGGTTTT TAATACAGAA TAATAAAATT 003920 003921 ATTGCTAAAC AGATGGAAGA GTTTTACTAA AGCTGGAAAA GACACTTTTG CTAATACACC CTATAGGCTG ATCTCAATTC 004000 004001 TCTCATTGTT AAGAATGCTT GGTCTAAGAG AGTCTTATTT ATGTGCCAAA TGGCTTTATT AAATCATTAT ATTAACACAG 004080 004081 AAAAAGTCCT ATTACAATGG CTGTCTCTGT ATGATCAAAA CTTGTCCGTG ATCCTGCTGA TAGCCTATTT ATTCTGAAAT 004160 004161 TTAAAAAGGT AACATTCCAG TACAGCCTAA TGTTTGGCCA AGTTTTACAA AATTCATTAT AATATGGCTG GAAGGGTTAC 004240 004241 TATGTCCTAG CCAGGGAAGG CCTAAGTTTT ATCAGGGCAG TAGTCCCCTG ACAAAAAGAA AACTGTGAAA AAGAGACCTC 004320 004321 TCATCCACTC ATAGAAATTA ATCCCTGGCA ACATTGTAAT GATTTCACCT GTAGAAATAC AATGGGTCTG TGATTTCTAC 004400 004401 TTTGATTAAT AAAAAAGCAA ACAAAAACAA AAACGCAGGG TAATCTCAGT GCTTTGGGAG GCTGAGGCAG GAGGAACACT 004480 004481 TGAGGCCACA AGTTTGAGAC CAGCCTGGGC AACATAGCAA GACCCTGTCA ATACAAAAAA ATTAAAAACT TAGTTAGGCA 004560 004561 TGGTAGCTTG TGCCTGTAAT TTCAGCCACT CAGGAGGCTG AGGTGGGAGG ATTGCTTGAA CTTGAGAGTT TGAGGCTACA 004640 004641 GTGAGCTATG ATCATGCCAC TGCACTCCAG CCTGGGTGAC AGAGCAAGAC TCTGACCCCG ACCTACAGCC CCCCGCCGAC 004720 004721 CAAAAAGAAT CCCAGTGGCA AATTCAAAGG CAAATTAATT GCACTGGTGA ACCAGGACTA TGGCATGTGA AAAGAGTTTA 004800 004801 AAAAGCCAGG AGAAGCAAAG TTTGTTGTAT ACTGGATTTT GAAACCGAAT AAACACAGAC GCACACACAA TTTTTGAATG 004880 004881 TAAAATTAAT ACATGTTGAT TGTAGAGAAA AAAAATCACT CCTAAGCCTA CCACTGAGAA AGCATATGTG TTTTGGCTGC 004960 004961 CCAAGATTGA TTTCTGCCTT CATGTGGAAG TAAGCTTTAA AGGCTCTGTG TTAGGGCATA GTCTAGAAAC ATGGGGCCCA 005040 005041 AGGGCACCGG GAAAACTTAC AAAGGGAAGA GATGGAACTG GGAGGGTTCA AGCTACCAGT TCCATCTCTC CATGTTTTAG 005120 005121 AGAATTGGGG CACTAAGTCA GCCAGGTAAG GTCAGGTCAG AGGAGGGCCC GGATGAAGCA TGAGATGCAG AGGGACAGTG 005200 005201 CGTGAATGGA GACCTTGGGT AGCACCAACG TGTAGCGGCA GAGGTGGGGT GGATGTGGCT GATGTCAGGG AGAGAATGGG 005280 005281 GAGCATGCAC AGGGCTCAGT CTTATACATA CATTGAAAAT CCTTTAGCCT TTCAAAGATT ATTAACCCAA ATCACCTTTC 005360 005361 TTGCTTACTC CAGATGCCTC AGCCTCTGAT ATAATTGCTA AGTATCTGCC GTGTTAAAAA TAAACATTTG AGAATCAAGG 005440 005441 GTGATTTTTC TCTTTTCTTT TGAATTGTAA TTGCGATGTA CTCATGGCCT GCCATGACGT GAGGTCTGGC TTAGATTAGC 005520 005521 CCCTGGCTGA GAGACCCATG CTAATTTAGT GCCTGCAATT ATGCCTGCCT CTAATCGTGT TCTGCTCTTT GTAGGATGTA 005600 005601 CCCTTTGCAA TAGAAGCAAC GGTTATGCTG GGTCATCTAT ACTTTCTTGC CCCAGGCCGC TTGTGACACA CATTGGTGAG 005680 005681 ACAACTGGCC AGGATTAGGG GTATGATCTG TGACCCTGAA ACAGAGTGAA ATTGATTGGC AATGAGGGAT GAGGGGGGTG 005760 005761 ATCCTATTAA AATTATAAGC ACCGTAAGTA TTCTAATATC TGACCCCTCA CTGTAATGGA TGTGCACCTA CCTCCC

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