ENST00000607810.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000607810.1

Source

Gencode19

Same with

lnc-MBOAT1-2:1,NONHSAT108009

Classification

intergenic

Length

1930 nt

Genomic location

chr6-:19802395..19804981

Exon number

3

Exons

19802395..19804141,19804402..19804508,19804906..19804981

Genome context

Sequence
000001 AATGACTTCC AGCTGGAGCA GCCCAGCCAG CCTGCGCGCT CACTCGCTTG CTTGCGCTGG GCTTCAGGGC GCCCGGAATT 000080
000081 TGCACTGTCT GTTAAAACGC GGTCATTGTT TTGCTTTCAA ATCGAACTTC ACGACAGTTA GCAACTTCAA GAACGCTTCC 000160
000161 AAATGGATAA ATCTTTCCAG AAGATTTCTT GCTTCAAAAC AGCTGCATTT TTGGAAGAAA GTCCACAACT GACAACTAAG 000240
000241 CAAAACCCTC CTGGTGGATA GCATAAATCT GCTTTGTTGA AGCTGCTCAT TTGTCTGATC TATGAGTCCA GAAGATGCAA 000320
000321 ACTCCCTTCC CAGCTTATGC AAAAATACTT CCAGTAAAAA CAAGCCCTTT GGCCCTTTTC TTTTGTCAGT CCAGATTTCA 000400
000401 GCATGTTCTT CGCTTTGTTA TTCATCATTT TATGTATTTG GACCCATCCT CAAACAGACT TTAAACCGTT TAAAGGCAAG 000480
000481 GAGGGACTCT TTCGTAAACC TTTAATCCCC TGGCCCAGCT GAGTAGATGC ACAGTGTCTT TTGATGATGG TGATATGGAA 000560
000561 TGATTAATAA CCACACAAGG CATTCGGTTG GTCAAGTCAC TGTTTATTGG CTCAAAATAA TCCTTGGTTT CTGTATGTCT 000640
000641 ACAGCTCACT TCCTAAACAG TTAAATCCGG AGAAGTCTAA TAGATAATAG TTGGTGATCA TAAATATAAA TAACCAATAC 000720
000721 ATTAGAATGT GTAGTCAAAA TAGGAATACT TGCTTTTCAC TTACTTCCCA CGGGTCGCTG CTGGTGGTAG TCAACACAAA 000800
000801 TAAAAATTTG AACTCATTTT GTTATTCATC TAAAATGAGA AACTCGGTGA AACATTGATT TTCTAAAATT GCTGCATATT 000880
000881 TAAATGTGAT TATAATTGCT TTTTAGCATT TTAAAATTGT AACATCGATA CCAAATGCTT AAGAATCTAA AGAATAGTCT 000960
000961 ATTGGGGCTG GCCTATTTTG TGTAAAATGG TCTGTATCAT AATGGATGAC TGATTATCCC ATCCACATTA TTTGGATTCA 001040
001041 CTTAATACTA GGTTTTAACG TTAGGAGAAT AAAACCCTCA AGAAACCTAA CATAGATTTG TATATTTAGT TTTCTCCTTC 001120
001121 CTTATCATCT TCCACCAGAC TTACAGGTGT TCCACCTGCT TGTAGTTTCG GTAATAATAC CAGCTGGCGG TGGTTCCTAA 001200
001201 CTCTAGCTAC ACTTTAAAAT TACCTCGTGC ATTTAAAAAA AAAATGCAGT TGTTTAGGTT CTTCCCCTAG ATATTTTAAT 001280
001281 TTACAAGGTT TGGGATGTGG CCTGGGCACC GATTTTTTTA ACTTTTTATT TGAATGTAGA CTTACAGGAA GTTGCAAAGA 001360
001361 TAGTACAGAG AGGTCTGATA GAGCCTCCAC TGTTGGTTAC ATCCCGCATA GCTAGAGCAC AATAATAAAG CCAGGACATT 001440
001441 GACACTGAGA TAAAATGTGC CTGTGATTCT GTGTCACCTT ATCCCTGAAG ACTCTTGTAA TCATTACCAC AATCAAAATA 001520
001521 CAAACTATTT CAACACCACG AAGATCTCTC TCATACAGTC CCTTTATGGT CGTCCCTTTC TTTCCCCCAC ACCATCCCTA 001600
001601 ACCCTTTGCA ACCATCAGTC TGTTCTCCAT TTCTATAATT TTGTCGTTTG GGGAATGTTT TATAAATTGG TCCTCACAGC 001680
001681 TTGTGACCTT CTAAGATTAG CTCACCATCC CCCCCACCCC CCCACCCCAC CCAACTCAGC AGAATGCCCT AGAGATTTAT 001760
001761 CCAAGTTATT GCAGGTATTT CTAGTTTGTT CCTTTCTGTT ACTGAGTTCT ACACTATGGG TGTAACACAG TTTGTTTAAT 001840
001841 CATTCAGCAT TCACCTATCA TACATTTTGG TTCCTTCTTT TTTTGGGCGG GGGGAGTGCC TATTACAAAT AAAACTGTCT 001920
001921 TGAAAAATTG
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Predicted Small Protein

Name ENST00000607810.1_smProtein_314:463
Length 50
Molecular weight 5794.8171
Aromaticity 0.163265306122
Instability index 71.706122449
Isoelectric point 10.0243530273
Runs 6
Runs residual 0.0396028681743
Runs probability 0.0649473002414
Amino acid sequence MQTPFPAYAKILPVKTSPLALFFCQSRFQHVLRFVIHHFMYLDPSSNRL
Secondary structure LLLLLHHHHLLLLLLLLHHHHHHHHHHHHHHHHHHHHHEEEELLLLLLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
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