NONHSAT139504

From LncRNAWiki
Revision as of 06:03, 13 October 2014 by 73.162.128.239 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT139504

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6649 nt

Genomic location

chrY-:15360259..15592550

Exon number

29

Exons

15360259..15361762,15362897..15363067,15372158..15372284,15409587..15409728,15410837..15411024,15414757..15414871,15417279..15417427,15417918..15417992,15418066..15418130,15435435..15435640,15436481..15436586,15438101..15438230,15447443..15448215,15466883..15467278,15467803..15467898,15469757..15469849,15471647..15471866,15472310..15472408,15478147..15478273,15481136..15481229,15505739..15505773,15508798..15508852,15522873..15522993,15526615..15526673,15560897..15560946,15582001..15582109,15587783..15587905,15591134..15591197,15591394..15592550

Genome context

Sequence
000001 GCTCATCGTT TGTTGTTTAG ATAATATCAT GAACTGATAA ATGCAGTTGC CACGTTGATT CCCTAGGGCC TGGCTTACCG 000080
000081 ACTGAGGTCA TAAGATATTA TGCCTTCTCT TTAGACTTGG TCAGTGGAGA GGAAATGGGC AAAGAACCAG CCTATGGAGG 000160
000161 TGACAAGGCC TTAGGGCCAA AAGTCTTGAG GGTGAAGGTT TAGGGCCTGC GCAGCTTCCC TGCCATGCCC CGCAAGGTCT 000240
000241 CGCATTCGCA AGGCTTGTGA CAGTGGGAGC CTCATTACGG ACTCTCCTAA AGTCCATGGT GTCCTCTTTT CGCATTTGCG 000320
000321 CCCCGTGGGT GATGCCCGAT GCCGCCCTTC CCATCGCTCT CTTCCCCTTC AAGCGTATCG CAACTGCAAA AACACCCAGC 000400
000401 ACAGACACTC CATTTTCTAT CTTAATGCAT TTAACTAGCA CAACCTACAG GTTGTTCCAT CCCAGAGACT ACCCTTTTCT 000480
000481 CCATAGACGT GACCATCAAC CAACCAGCGG TCAGAATCAG TCAGCCTCTG TCATGTTCCT AGGTCCTTGG CGAACTGGCT 000560
000561 GGGCGGGGTC CCAGCAGCCT AGGAGTACAG TGGAGCAATG CCTGACGTAA GTCAACAAAG ATCACGTGAG ACGAATCAGT 000640
000641 CGCCTAGATT GGCTACAACT AAGTGGTTGG GAGCGGGGAG GTCGCGGCGG CTGCGTGGGG TTCGCCCGTG ACACAATTAC 000720
000721 AACTTTGTGC TGGTGCTGGC AAAGTTTGTG ATTTTAAGAA ATTCTGCTGT GCTCTCCAGC ACTGCGAGCT TCTGCCTTCC 000800
000801 CTGTAGTTTC CCAGATGTGA TCCAGGTAGC CGAGTTCCGC TGCCCGTGCT TCGGTAGCTT AAGTCTTTGC CTCAGCTTTT 000880
000881 TTCCTTGCAG CCGCTGAGGA GGCGATAAAA TTGGCGTCAC AGTCTCAAGC AGCGATTGAA GGCGTCTTTT CAACTACTCG 000960
000961 ATTAAGGTTG GGTATCGTCG TGGGACTTGG AAATTTGTTG TTTCCATGAA ATCCTGCGCA GTGTCGCTCA CTACCGCCGC 001040
001041 TGTTGCCTTC GGTGATGAGG CAAAGAAAAT GGCGGAAGGA AAAGCGAGCC GCGAGAGTGA AGAGGAGTCT GTTAGCCTGA 001120
001121 CAGTCGAGGA AAGGGAGGCG CTTGGTGGCA TGGACAGCCG TCTCTTCGGG TTCGTGAGGC TTCATGAAGA TGGCGCCAGA 001200
001201 ACGAAGACCC TACTAGGCAA Gatggagttt cactcttgtt gccctggctg gagtggaata gtgcggtctc acctcactgc 001280
001281 aacctctgtg ttctgggttc aagtgattct cctgcctcag cctcccaagt agctgggatt acagGCTGTT CGCTGCTACG 001360
001361 AATCTTTAAT CTTAAAAGCT GAAGGAAAAG TGGAGTCTGA CTTCTTTTGC CAATTAGGTC ACTTCAACCT CTTGTTGGAA 001440
001441 GATTATTCAA AAGCATTATC TGCATATCAG AGATATTACA GTTTACAGGC TGACTACTGG AAGAATGCTG CGTTTTTATA 001520
001521 TGGCCTTGGT TTGGTCTACT TCTACTACAA TGCATTTCAT TGGGCAATTA AAGCATTTCA AGATGTCCTT TATGTTGACC 001600
001601 CCAGCTTTTG TCGAGCCAAG GAAATTCATT TACGACTTGG GCTCATGTTC AAAGTGAACA CAGACTACAA GTCTAGTTTA 001680
001681 AAGCATTTTC AGTTAGCCTT GATTGACTGT AATCCATGTA CTTTGTCCAA TGCTGAAATT CAATTTCATA TTGCCCATTT 001760
001761 GTATGAAACC CAGAGGAAGT ATCATTCTGC AAAGGAGGCA TATGAACAAC TTTTGCAGAC AGAAAACCTT CCTGCACAAG 001840
001841 TAAAAGCAAC TGTATTGCAA CAGTTAGGTT GGATGCATCA TAATATGGAT CTAGTAGGAG ACAAAGCCAC AAAGGAAAGC 001920
001921 TATGCTATTC AGTATCTCCA AAAGTCTTTG GAGGCAGATC CTAATTCTGG CCAATCGTGG TATTTTCTTG GAAGGTGTTA 002000
002001 TTCAAGTATT GGGAAAGTTC AGGATGCCTT TATATCTTAC AGGCAATCTA TTGATAAATC AGAAGCAAGT GCAGATACAT 002080
002081 GGTGTTCAAT AGGTGTGTTG TATCAGCAGC AAAATCAGCC TATGGATGCT TTACAGGCAT ATATTTGTGC TGTACAATTG 002160
002161 GACCATGGGC ATGCCGCAGC CTGGATGGAC CTAGGTACTC TCTATGAATC CTGCAATCAA CCTCAAGATG CCATTAAATG 002240
002241 CTACCTAAAT GCAGCTAGAA GCAAACGTTG TAGTAATACC TCTACGCTTG CTGCAAGAAT TAAATTTCTA CAGAATGGTT 002320
002321 CTGATAACTG GAATGGTGGC CAGAGTCTTT CACATCATCC AGTACAGCAA GTTTATTCGT TGTGTTTGAC ACCACAGAAA 002400
002401 TTACAGCACT TGGAACAACT GCGAGCAAAT AGAGATAATT TAAATCCAGC ACAGAAGCAT CAGCTGGAAC AGTTAGAAAG 002480
002481 TCAGTTTGTC TTAATGCAGC AAATGAGACA CAAAGAAGTT GCTCAGGTAC GAACTACTGG AATTCATAAC GGGGCCATAA 002560
002561 CTGATTCATC ACTGCCTACA AACTCTGTCT CTAATCGACA ACCACATGGT GCTCTGACCA GAGTATCTAG CGTCTCTCAG 002640
002641 CCTGGAGTTC GCCCTGCTTG TGTTGAAAAA CTTTTGTCCA GTGGAGCTTT TTCTGCAGGC TGTATTCCTT GTGGCACATC 002720
002721 AAAAATTCTA GGAAGTACAG ACACTATCTT GCTAGGCAGT AATTGTATAG CAGGAAGTGA AAGTAATGGA AATGTGCCTT 002800
002801 ACCTGCAGCA AAATACACAC ACTCTACCTC ATAATCATAC AGACCTGAAC AGCAGCACAG AAGAGCCATG GAGAAAACAG 002880
002881 CTATCTAACT CCGCTCAGGG GCTTCATAAA AGTCAGAGTT CATGTTTGTC AGGACCTAAT GAAGAACAAC CTCTGTTTTC 002960
002961 CACTGGGTCA GCCCAGTATC ACCAGGCAAC TAGCACTGGT ATTAAGAAGG CGAATGAACA TCTCACTCTG CCTAGTAATT 003040
003041 CAGTACCACA GGGGGATGCT GACAGTCACC TCTCCTGTCA TACTGCTACC TCAGGTGGAC AACAAGGCAT TATGTTTACC 003120
003121 AAAGAGAGCA AGCCTTCAAA AAATAGATCC TTGGTGCCTG AAACAAGCAG GCATACTGGA GACACATCTA ATGGCTGTGC 003200
003201 TGATGTCAAG GGACTTTCTA ATCATGTTCA TCAGTTGATA GCAGATGCTG TTTCCAGTCC TAACCATGGA GATTCACCAA 003280
003281 ATTTATTAAT TGCAGACAAT CCTCAGCTCT CTGCTTTGTT GATTGGAAAA GCCAATGGCA ATGTGGGTAC TGGAACCTGT 003360
003361 GACAAAGTGA ATAATATTCA CCCAGCTGTT CATACAAAGA CTGATCATTC TGTTGCCTCT TCACCCTCTT CAGCCATTTC 003440
003441 CACAGCAACA CCTTCTCCTA AATCCACTGA GCAGAGAAGC ATAAACAGTG TTACCAGCCT TAACAGTCCT CACAGTGGAT 003520
003521 TACACACAGT CAATGGAGAG GGGCTGGGGA AGTCACAGAG CTCTACAAAA GTAGACCTGC CTTTAGCTAG CCACAGATCT 003600
003601 ACTTCTCAGA TCTTACCATC AATGTCAGTG TCTATATGCC CCAGTTCAAC AGAAGTTCTG AAAGCATGCA GGAATCCAGG 003680
003681 TAAAAATGGC TTGTCTAATA GCTGCATTTT GTTAGATAAA TGTCCACCTC CAAGACCACC AACTTCACCA TACCCACCCT 003760
003761 TGCCAAAGGA CAAGTTGAAT CCACCCACAC CTAGTATTTA CTTGGAAAAT AAACGTGATG CTTTCTTTCC TCCATTACAT 003840
003841 CAATTTTGTA CAAATCCAAA AAACCCTGTT ACAGTAATAC GTGGCCTTGC TGGAGCTCTT AAATTAGATC TTGGACTTTT 003920
003921 CTCTACCAAA ACTTTGGTAG AAGCTAACAA TGAACATATG GTAGAAGTGA GGACACAGTT GCTGCAACCA GCAGATGAAA 004000
004001 ACTGGGATCC CACTGGAACA AAGAAAATCT GGCGTTGTGA AAGCAATAGA TCTCATACTA CAATTGCCAA ATACGCACAA 004080
004081 TACCAGGCTT CCTCCTTCCA GGAATCATTG AGAGAAGAAA ATGAGAAAAG AACACAACAC AAAGATCATT CAGATAACGA 004160
004161 ATCCACATCT TCAGAGAATT CTGGAAGGAG AAGGAAAGGA CCTTTTAAAA CCATAAAATT TGGGACCAAC ATTGACCTCT 004240
004241 CTGATAACAA AAAGTGGAAG TTGCAGTTAC ATGAACTGAC TAAACTTCCT GCTTTTGCGC GTGTGGTGTC AGCAGGAAAT 004320
004321 CTTCTAACCC ATGTTGGGCA TACCATTCTG GGCATGAATA CAGTACAACT GTATATGAAA GTTCCAGGGA GTCGGACACC 004400
004401 AGGTCACCAA GAAAATAACA ACTTCTGCTC TGTTAACATA AATATTGGTC CAGGAGATTG TGAATGGTTT GTTGTACCTG 004480
004481 AAGATTATTG GGGTGTTCTG AATGACTTCT GTGAAAAAAA TAATTTGAAT TTTTTAATGA GTTCTTGGTG GCCCAACCTT 004560
004561 GAAGATCTTT ATGAAGCAAA TGTCCCTGTG TATAGATTTA TTCAGCGACC TGGAGATTTG GTCTGGATAA ATGCAGGCAC 004640
004641 TGTGCATTGG GTTCAAGCTG TTGGCTGGTG CAATAACATT GCCTGGAATG TTGGTCCACT TACAGCCTGC CAGTATAAAT 004720
004721 TGGCAGTGGA ACGGTATGAA TGGAACAAAT TGAAAAGTGT GAAGTCACCA GTACCCATGG TGCATCTTTC CTGGAATATG 004800
004801 GCACGAAATA TCAAAGTCTC AGATCCAAAG CTTTTTGAAA TGATTAAGTA TTGTCTTTTG AAAATTCTGA AGCAATATCA 004880
004881 GACATTGAGA GAAGCTCTTG TTGCAGCAGG AAAAGAGGTT ATATGGCATG GGCGGACAAA TGATGAACCA GCTCATTACT 004960
004961 GTAGCATTTG TGAGGTGGAG GTTTTTAATC TGCTTTTTGT CACTAATGAA AGCAATACTC AAAAAACCTA CATAGTACAT 005040
005041 TGCCATGATT GTGCACGAAA AACAAGCAAA AGTTTGGAAA ATTTTGTGGT GCTCGAACAG TACAAAATGG AGGACCTAAT 005120
005121 CCAAGTTTAT GATCAATTTA CACTAGCTCT TTCATTATCA TCCTCATCTT GATATAGTTC CATGAATATT AAATGAGATT 005200
005201 ATTTCTGCTC TTCAGGAAAT TTCTGCACCA CTGGTTTTGT AGCTGTTTCA TAAAACTGTT GACTAAAAGC TATGTCTATG 005280
005281 CAACCTTCCA AGAATAGTAT GTCAAGCAAC TGGACACAGT GCTGCCTCTG CTTCAGGACT TAACATGCTG ATCCAGCTGT 005360
005361 ACTTCAGAAA AATAATATTA ATCATATGTT TTGTGTACGT ATGACAAACT GTCAAAGTGA CACAGAATAC TGATTTGAAG 005440
005441 ATAGCCTTTT TTATGTTTCT CTATTTCTGG GCTGATGAAT TAATATTCAT TTGTATTTTA ACCCTGCAGA ATTTTCCTTA 005520
005521 GTTAAAAACA CTTTCCTAGC TGGTCATTTC TTCATAAGAT AGCAAATTTA AATCTCTCCT CGATCAGCTT TTAAAAAATG 005600
005601 TGTACTATTA TCTGAGGAAG TTTTTTACTG CTTTATGTTT TTGTGTGTTT TGAGGCCATG ATGATTACAT TTGTGGTTCC 005680
005681 aaaataattt ttttaaatat taataGCCCA TATACAAAGA TAATGGATTG CACATAGACA AAGAAATAAA CTTCAGATTT 005760
005761 GTGATTTTTG TTTCTAAACT TGATACAGAT TTACACTATT TATAAATACG TATTTATTGC CTGAAAATAT TTGTGAATGG 005840
005841 AATGTTGTTT TTTTCCAGAC GTAACTGCCA TTAAATACTA AGGAGTTCTG TAGTTTTAAA CACTACTCCT ATTACATTTT 005920
005921 ATATGTGTAG ATAAAACTGC TTAGTATTAT ACAGAAATTT TTATTAAAAT TGTTAAATGT TTAAAGGGTT TCCCAATGTT 006000
006001 TGAGTTTAAA AAAGACTTTC TGAAAAAATC CACTTTTTGT TCATTTTCAA ACCTAATGAT tatatgtatt ttatatgtgt 006080
006081 gtgtatgtgt acacacatgt ataatatata CAGAAACCTC GATATATAAT TGTATAGATT TTAAAAGTTT TATTTTTTAC 006160
006161 ATCTATGGTA GTTTTTGAGG TGCCTATTAT AAAGTATTAC GGAAGTTTGC TGTTTTTAAA GTAAATGTCT TTTAGTGTGA 006240
006241 TTTATTAAGT TGTAGTCACC ATAGTGATAG CCCATAAATA ATTGCTGGAA AATTGTATTT TATAACAGTA GAAAACATAT 006320
006321 AGTCAGTGAA GTAAATATTT TAAAGGAAAC ATTATATAGA TTTGATAAAT GTTGTTTATA ATTAAGAGTT TCTTATGGAA 006400
006401 AAGAGATTCA GAATGATAAC CTCTTTTAGA GAACAAATAA GTGACTTATT TTTTTAAAGC TAGATGACTT TGAAATGCTA 006480
006481 TACTGTCCTG CTTGTACAAC ATGGTTTGGG GTGAAGGGGA GGAAAGTATT AAAAAATCTA TATCGCTAGT AAATTGTAAT 006560
006561 AAGTTCTATT AAAACTTGTA TTTCATATGA AAAATTTGCT AATTTAATAT TAACTCATTT GATAATAATA CTTGTCTTTT 006640
006641 CTACCTCTC
[back to top]