NONHSAT076174

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT076174

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2638 nt

Genomic location

chr2-:196346073..196479610

Exon number

11

Exons

196346073..196346550,196357436..196357446,196380161..196380423,196401933..196402485,196424628..196424805,196434352..196434586,196437375..196437694,196456153..196456166,196458736..196458964,196479223..196479253,196479275..196479610

Genome context

Sequence
000001 TAGCAGGGTC TTGCTATGTT GCCTAGGTTG GTCTCAAACT CCTGGACTCA AGTGATCCTG CCACCTCAGC CTCCCAAAGT 000080
000081 GCCAGGATAA CAGTCCTAAG CCACCATGCC TGACTATTTT TTTCATTTAT ATTGCTGGCA ATAACACAAA TAATTGAAAT 000160
000161 CAGTTTCAAG TCATCAAAAG ATAACTGAGG CTTCCCAGTT TGTGGGGGAG AAAATGGTGA ATTAGCAGAG TTTGTCTAAA 000240
000241 GCTTAAGTTC TTTTAGAGTG AAAGTGTTTT AAGGGGGTTT TTTGATATTT TAATACCAAA AGCCAAAACA TCTCCAGCAA 000320
000321 TATTTTATGT GCTCAAAGTG GGGGGTTGTG GAGCGCTTTT TTTTTTTTTT GAGATGGAGT TTCACTCTTT GTTGCCCAGG 000400
000401 CTGGAGTACA ATGGCGTGAT CTCAGCTCAC TGCAAACTCT GCCTCTCGGG TTCAAGCGAT TCTCCTGCCT CAGCCTCCCC 000480
000481 AGTAGCTGGG ATTACAGGCG CCTGCCACCA TGCCCAGCTA ATTTTTTTGT ATTTTTAGTA GAGACAGGGT TTCACCACGT 000560
000561 TGGCCAGGGT GGTCTTGAAC TCCTGAGTAA GCCGAGATTG TCCAGGCTGA CGGGCAATGG CGGGATCATG GCTCAGTGCA 000640
000641 GTTTCGATCT CCTGGGCTCA AGTGGTCCTC CCACCTCAGC CTCCCAAGAA GTTGGGACCA CAGGAGGGGG CCACCATACC 000720
000721 CGGCTAATTT TTTTGATGTT TTGTAGATAT AGGGTCTCCC TATGTTGCCC AGGTTGGTCT CTAACTCCTG AGCTCAAGTG 000800
000801 TTCTGCCCAC TTCAGCCTCC CAAAGTGCTA GGGTGAAAGG CCTGAGTCAC CACTGCCAGC CAATTGCTGA AGTTTTTGGA 000880
000881 AAAGAAAATT CTTGTCTGAT CCATGGGAGT TGCTTCAAAG GCCACAGGAT TCTGCTGCAA ATTCTAACAG GAGGAGGCAA 000960
000961 TGGCAGCCCT TACTAAAACC GCAGAACTAC AGGAAGAGGA TCCCTGAGTG GGATTCCTGT GTGAAAGGCA TTTTCACCTT 001040
001041 TTTGTGTATC TTCAGAATCT TAACTTTCAT GAGAGAAGAA TAGAAATGCA ACAATGGAAC AATCCACTGT ATACACGTAG 001120
001121 CTGACAATTT AATAAACTTG AAGGAAATGC TACAGGATTC TACAAATAAT AACTGTCATC CTTATGGAGC AGGTACCAGA 001200
001201 TGACAATAAA CAGGCCAAAC TGCAATGACA TCTCAGCAAA GCCCACATAT ACCACTTATA TATTTGGGAG ATTTTCATAG 001280
001281 TTTTGAAATG CTTTTGAATC TTTTTAAAGC CCTGTTTCTC TGCAATAGTA ATAGAGATGG GGTTTTGCCG TGTTGCTCAG 001360
001361 GCTGGACTGA AACTCCTGAG CACAAACAGT TCACCAACCT TGGCTCCCCG AAATGTTGGA ATTACAGGCA TGAGCCTCCC 001440
001441 TACCCTGCCA TAAATTAATT CCTGTCTTTA ATAGCCTCTC TTGTTCTCCA TTTTCTCTAT TTCTTCTACA AGATAATTCT 001520
001521 GCATGTTTTC TATCATTGAA TTTTATACAG TCTGGGAGAA AAGCAATAAG CCTTATTATA AATTTCTTCA GGATACAGGA 001600
001601 CATAGAGTTT TCCTTCCTTT CTTTTTTATT TCTTCATACA TCAAACACCT GTTATATAAA AGAGAATGTG CTGCAAACTA 001680
001681 AGGAATAAAA ATATGCATGA TAGGGTCCTT GCTCTCCAAG AGCTGACAAA CAAGCAAGTA AGATGGGCAT GTAACCCAAC 001760
001761 GTATAAGATG GCACTATAGA AACACCATGT CTCTTTGCAA AAGAGAAAGC TGATGGCTTG CTGGCTGACA GATAAAAGCA 001840
001841 CCATGTCTGT ATCCAGTCTG TCTTCAGCTT CTTTTGTTGT TTACTTAGTT GCCGCCCCCG CCTCTCCTTC CACACCTCCC 001920
001921 CGCAAGCTGA GGGAGCTGGC TCCGGCCTTG GCCAGCCTGA AAGGGGCTCC CATAGTGCAG CGGTGGGCTG AAGGGCTCCT 002000
002001 CAAGCGCAGC CAGAGTGGGC GCCAAGGCCC AGGAGGCACG GAGAGCGAGC GAGGGCTGCC AGGGCTGCCA GCATGCTGTC 002080
002081 ACCTCTCAAT ATTAGGAGCA GAGAAGCCAG CTCAGCCAAC CTGGCATTCT GATCTATAGA AACTGAGAGC AGAACTTATC 002160
002161 TTTTATAAAA ATGAACATTT ATTTAGATGA AGGTTAAAAG ACAGAAATGC TGTTCTGAGT GAAATGTCTA TAATAATTGA 002240
002241 ACTTTTGAGC CACAGGGGCA AGTCGGTACT TCACCAGGTA CTCTCCAAAA ATCTTTTTGT AGGCTTTAAA ATACAAATGC 002320
002321 CTTTAGAATG TCAAACTTAT ATTTCTTCAA ACGAAAGAAA ATCCTTCTGG AATATTAAAT GGGCTTATAA AGAAGAGTTT 002400
002401 TGGCTAAAAG GAGATCAAAT ATTTTATCAA AAGTTCGGTT CATCATTGCG AGAGAAAAGA TCATGGAATA GCTGCTTAAG 002480
002481 ATTACAAAGG AGCCGTGATA GCTTCTGTTA ATGATAGTGC ATAGCCAATT TTGTCTTTGT ACTTGCTTTA TAAGAGTTCT 002560
002561 CACCATTGGT TTTCTTTTGT ACTTTTCTTT TTTGGTGATT ATAGAACTTG ATTATTATGG GTTTGAAAAT TGTAGAGG
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Predicted Small Protein

Name NONHSAT076174_smProtein_326:418
Length 31
Molecular weight 3624.305
Aromaticity 0.266666666667
Instability index 46.37
Isoelectric point 8.68170166016
Runs 5
Runs residual 0.0355855855856
Runs probability 0.0478714008126
Amino acid sequence MCSKWGVVERFFFFLRWSFTLCCPGWSTMA
Secondary structure LLLLLLEEHHHHHHEEEEEEEELLLLLLLL
PRMN -
PiMo -