NONHSAT076450

From LncRNAWiki
Revision as of 06:37, 13 October 2014 by 73.162.128.239 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT076450

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

743 nt

Genomic location

chr2-:203194362..203202527

Exon number

4

Exons

203194362..203194632,203195215..203195540,203202375..203202395,203202403..203202527

Genome context

Sequence
000001 GGCAGGGCGC GGTGGCTCAC GCCTGTAATC CCAGCTGTCA GGGAGGCAGA GGCCGGAGGA TAGCTTGAGC CCAGGAGTTT 000080
000081 GAGACCTGCC TGGGCAATAT AGCGAGACCC CGTTCTCCAC AAAAAAAAAA AAGACAAAAC AAAAAAATTC GTGGTTGGTT 000160
000161 GAATCTATGG ATACAAAACC CATCCATAGA TACCGAGAGC TGACTATAAA CATGAGTTCA GGCTGATATA AATACATTAA 000240
000241 TGAATAAAAA TTATTATTTT ATTTTATTTT ATTTTATTTT ATTTTTTGAG ACTAGGTCTT ACTCTGTCAC CCAGGTGGCA 000320
000321 CAATCTCAGC TCACTGCAAC CTCAGCCTCC TGGGCTCAAG TAATTCTCCA GCCTCCTGTG TAGCCAGGAC TACAGGCACA 000400
000401 AGCCACCAAT GCCCAGCTAA TTTTTGTACT TTTTAAAATA GAGGCAGGGG TCTCGCCATG TTGCCCAGGC TGGTGAAACC 000480
000481 CCTTCTCTAC TAAAAACATA AAAAAATAGC CTGTGTGATG CATGCCTGCA GTCCCAGCTA CTTCAGAGGC TGAGGCAAGA 000560
000561 GGACTGTTTG AGCCCCGGAG GTGGAGGTTG CAATGAGCTG AGATCAGGCC ACTGCACTCC AGCCTGGGTG ACAGAACAAG 000640
000641 ACCTTGTCTG AATTTTAAAA TAATAACAGT AATAATGTCT GTAAATACTC CCTTTTCCAG GAAATGAACT TAATTCCCTC 000720
000721 CCAATTCCCT TTCTACCTTT TTG
[back to top]

Predicted Small Protein

Name NONHSAT076450_smProtein_239:382
Length 48
Molecular weight 5513.2775
Aromaticity 0.212765957447
Instability index 68.8895744681
Isoelectric point 8.13848876953
Runs 8
Runs residual 0.00393617021277
Runs probability 0.0198838544427
Amino acid sequence MNKNYYFILFYFILFFETRSYSVTQVAQSQLTATSASWAQVILQPPV
Secondary structure LLLEEEEEEEEEEEEEELLEEEHHHHHHHHHHHHLHHHHHHHHLLLL
PRMN -
PiMo -