NONHSAT077677
Revision as of 07:15, 13 October 2014 by 73.162.128.239 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT077677 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
587 nt |
Genomic location |
chr2-:239098332..239112321 |
Exon number |
4 |
Exons |
239098332..239098613,239102916..239102972,239103446..239103511,239112140..239112321 |
Genome context |
|
Sequence |
000001 GACTGAcggc gccggccgcc cctgcccgtc gcccgcccgc tgctgccgcc cgcccggggT GTGGAGCCCG GCCGCTGCTC 000080
000081 GCGGGCTGAG TGTCTGTCGC TGCTGCCGCC TCCACCCAGC CTCCGCCATG GACCTCTTCG GGGACCTGCC GGAGCCCGAG 000160 000161 CGCTCGCCGC GCCCGGCTGC CGGGAAAGAA GCTCAGAAAG GACCCCTGCT CTTTGATGAC CTCCCTCCGG CCAGCAGTAC 000240 000241 TGACTCAGGA TCAGGGGGAC CTTTGCTTTT TGATGATCTC CCACCCGCTA GCAGTGGCGA TTCAGGTTCT CTTGCCACAT 000320 000321 CAATATCCCA GATGGTAAAG ACTGAAGGGA AAGGAGCAAA GAGAAAAACC TCCGAGGAAG AGAAGAATGG CAGTGAAGAG 000400 000401 CTTGTGGAAA AGAAAGTTTG TAAAGGTTTT CAGACAATTT GAAAACAAAT GTATTAGACT TCATATTTTA AAACAACCCA 000480 000481 GAGCAAAACC AGTTTCAGCT TTCTAATAAT ACTTTCTTTT TATGTCTGTA TTTAAGAAAT AAGTAGGGTT CCCTTTTTGC 000560 000561 AAATGAATTT CCAAGTTTCT CTGTGCT |
Predicted Small Protein
Name | NONHSAT077677_smProtein_215:337 |
Length | 41 |
Molecular weight | 4560.3683 |
Aromaticity | 0.075 |
Instability index | 42.25 |
Isoelectric point | 6.68780517578 |
Runs | 6 |
Runs residual | 0.0280241935484 |
Runs probability | 0.0474003415179 |
Amino acid sequence | MTSLRPAVLTQDQGDLCFLMISHPLAVAIQVLLPHQYPRW |
Secondary structure | LLLLLLLLLLLLLLLHHHHEELLHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |