NONHSAT122160
Revision as of 07:32, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122160 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
698 nt |
Genomic location |
chr7-:97595659..97601656 |
Exon number |
4 |
Exons |
97595659..97596289,97598317..97598364,97599082..97599157,97601447..97601656 |
Genome context |
|
Sequence |
000001 GCGGTGTTCT AGCAGGTGGC TGCTTTCTCT GGGCTGGCTG TGGGAGGCTC CCGAGGTGGG GACCCGGCCG GGATGGCTGC 000080
000081 AGCGGCGGCC GGGGCTGGGA GCGGGCCCTC GGCGGCCCAG GAGAAGCAGT TCCTGCCGGC GCTGCTGAGT TTCTTCATCT 000160 000161 ACAACCCGCG CTTCTGGCCG CGGGAAGGAG AGGTTGTTCG GAATCCTATA ATTGAAAAAC AGTAAAGATG GAAAACCAGT 000240 000241 TATTGAATAT CAAGAGGAGG AGTTGTTGGA CAAGGTTTAT AGCTCGGTGC TGCAGCAGTG CTACAGCATG TACAAGAAGT 000320 000321 CTCAGGGGAT CCAGAACTGC AGCCAGTCCT TGCTGGGCTG TTCCTGTCCA TGTGCCTGGT CACGGTGCTG GGGAACCTGC 000400 000401 TCATCATCCT GGCCATCAGC CCTGACTCCC ACCTCCACAC CCCCATGTAC TTCTTCCTCT CCAACCTGTC CTTGCCTGAC 000480 000481 ATCGGTTTCA CCTCCACCAC GGTCCCCAAG ATGATTGTGG ACATCCAGTC TCACAGCAGA GTCATCTCCT ATGCAGGCTG 000560 000561 CCTGACTCAG ATGTCTCTCT TTGCCATTTT TGGAGGCATG GAAGAGAGAC ATGCTCCTGA GTGTGATGGC CTATGACTGG 000640 000641 TTTGTAGCCA TCTGTCACCC GCTATATCAT TCACCATCAT GAACCCGTGT TTCTGTGC |
Predicted Small Protein
Name | NONHSAT122160_smProtein_227:424 |
Length | 66 |
Molecular weight | 7061.011 |
Aromaticity | 0.0461538461538 |
Instability index | 86.0907692308 |
Isoelectric point | 9.93475341797 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0334353961805 |
Amino acid sequence | MENQLLNIKRRSCWTRFIARCCSSATACTRSLRGSRTAASPCWAVPVHVPGHGAGEPAHH PGHQP |
Secondary structure | LLLHHHLLLHHHHHHHHHHHHLLLLHHHHHLLLLLLLLLLLLEEEEEELLLLLLLLLLLL LLLLL |
PRMN | - |
PiMo | - |