NONHSAT056436

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT056436

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

754 nt

Genomic location

chr17-:79091800..79102700

Exon number

2

Exons

79091800..79092122,79102270..79102700

Genome context

Sequence
000001 AGCCTCTTGC TCAGCCACAC TGCCTGCCTG GTGCAGCCCA TGTGACGGGT CGAGCTCCGG GCCCTGCTGT CCCTGGCCGG 000080
000081 GCTATCCCAG TGGCTTCAGG CACCTTCTCC AGACCTACCC AGAAAGATGC CCGGATGGAT CCTGCAGCTC CGTGGCTTTT 000160
000161 CTGGGAAGCA GCGGCCCCTG CTCTCAAGAG ACCCTGGCTC CTGATGGTGG CCCCAAGGTT GCCAGCTGGT GCTAGGGACT 000240
000241 CAGGACAGTT TCCCAGAAAA GGCCAAGCGG GCAGCCCCTC CAGGGGCCGG GTGAGGAAGC TGGGGGGTGC GGAGGCCACA 000320
000321 CTGGGTCCCT GAACCCCCTG CTTGGTTACA GTGCAGCTCC TCAAGTCCAC AGACGTGGGC CGGCACAGCC TCCTGTACCT 000400
000401 GAAGGAAATC GGCCGTGGCT GGTTCGGGAA GGTGGGGACC ACGTCCTGGT GGCTGTTGGC AGCAGATTCA GGTGCCTCTG 000480
000481 CCCCACGCGG TGTCCTGGAG AAGCCCGTGG GATGAGAGGC CCTGGATGGT AGATCGGCCA TGCTCCGCCC CAGAGGCAGA 000560
000561 ATTCGTCTGG GCTTTTAGGC TTGCTGCTAG CCCCTGGGGG CGCCTGGAGC CACAGTGGGT GTCTGTACAC ACATACACAC 000640
000641 TCAAAAGGGG CCAGTGCCCC TGGGCACGGC GGCCCCCACC CTCTGCCCTG CCTGCCTGGC CTCGGAGGAC CCGCATGCCC 000720
000721 CATCCGGCAG CTCCTCCGGT GTGCTCACAG GACA
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Predicted Small Protein

Name NONHSAT056436_smProtein_134:331
Length 66
Molecular weight 6891.9456
Aromaticity 0.0769230769231
Instability index 50.6707692308
Isoelectric point 11.6231079102
Runs 9
Runs residual 0.0118269230769
Runs probability 0.0332980038863
Amino acid sequence MDPAAPWLFWEAAAPALKRPWLLMVAPRLPAGARDSGQFPRKGQAGSPSRGRVRKLGGAE
ATLGP
Secondary structure LLLLLHHHHHHHHHHHHLLLEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLEE
EELLL
PRMN -
PiMo -