NONHSAT056930
Revision as of 08:37, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056930 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
722 nt |
Genomic location |
chr18+:2577848..2582525 |
Exon number |
4 |
Exons |
2577848..2577868,2577968..2578140,2578926..2579028,2582101..2582525 |
Genome context |
|
Sequence |
000001 TGTATTCGAC AACTCTGTGA GTTTCTTACA GAAAATGGTT ATGCACATAA TGTGTCCATG AAATCTCTAC AAGCTCCCTC 000080
000081 TGTTAAAGAC TTCCTGAAGA TCTTCACATT TCTTTATGGC TTCCTGTGCC CCTCATACGA ACTTCCTGAC ACAAAGTTTG 000160 000161 AAGAAGAGGT TCCAAGAATC TTTAAAGACC TTGGGTATCC TTTTGCACTA TCCAAAAGCT CCATGTACAC AGTGGGGGCT 000240 000241 CCTCATACAT GGCCTCACAT TGTGGCAGCC TTAGTTTGGC TAATAGACTG CATCAAGagt cttgctttgt tgcccaggct 000320 000321 ggaatgcagt ggcatgatct cagctcacta caatctccac ctcccaggtt caagcaattc tcatgcctca gcctcccaag 000400 000401 tagctaggat tacaggtgcc caccaccacg cccagctaat ttttgtattt tcagtagaga cagcgtgtca ccatgttggc 000480 000481 caggctgatc ttgaactcct gacctaaggt gatccacctg cctcagcctc ccaaagtgct gggattacaa gtgtgagcca 000560 000561 ccatgcctgg ccatgtagtt ttcttaatat caaacaacat attttttatc aatgccatgt gttttgttac tatgatgaac 000640 000641 agactctctt tttttaattc tatttccatg gtgattatta ctaAAAGAGT TTTTTGTGTT TACTACCCTT ATTGAATTGC 000720 000721 TT |
Predicted Small Protein
Name | NONHSAT056930_smProtein_248:406 |
Length | 53 |
Molecular weight | 5704.4384 |
Aromaticity | 0.0769230769231 |
Instability index | 83.0826923077 |
Isoelectric point | 7.79718017578 |
Runs | 7 |
Runs residual | 0.0157540199913 |
Runs probability | 0.0474424003835 |
Amino acid sequence | MASHCGSLSLANRLHQESCFVAQAGMQWHDLSSLQSPPPRFKQFSCLSLPSS |
Secondary structure | LLLLLLLHHHHHHHHHHHHHHHHHLLEEELLLLLLLLLLLLLEEEEEELLLL |
PRMN | - |
PiMo | - |