NONHSAT081262
Revision as of 08:48, 13 October 2014 by 73.162.128.239 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT081262 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
584 nt |
Genomic location |
chr21+:18003110..18012950 |
Exon number |
2 |
Exons |
18003110..18003291,18012549..18012950 |
Genome context |
|
Sequence |
000001 cacagaatgg gataactgcc tggcactcac caagctacac ttgaagagga tcaatccatg tcatcatgtc cccaatttca 000080
000081 tagcaccaag tattttgttt attcacaaat gccctattat ggacatctag caaacaatga tacatcagaa aaggagatgt 000160 000161 gcataaattt tcatggaata agGTTGTGGA AAATGCACTA GAATCAACAA ACATGGGGAC TAATtcaact cggatatcat 000240 000241 gtcttcagag aagtttctcc tgccctcctc tccctgtaga attaagtatt cttccactgt gccaccctct aacttgtgct 000320 000321 catatcttcc tctattgtag ttatgtgttc acatccctgt tgtttttgta ccggcttctc ccaaagggag acatttagtc 000400 000401 ttattcttct tggtaacttt agcacagacc tggcagattg ttgacactca acaaatgttt attgactcaa atgcatTCAG 000480 000481 TTGAACATTG ACCTTTGATC AACTCTGGGA AAAGTCTGCA AAGCTAGTTA GGACATTCAG AAATTCATTT CATTTCAATC 000560 000561 CTAACTAAAT AAATTATTGA AGTC |
Predicted Small Protein
Name | NONHSAT081262_smProtein_212:397 |
Length | 62 |
Molecular weight | 6891.1938 |
Aromaticity | 0.114754098361 |
Instability index | 60.9950819672 |
Isoelectric point | 8.37347412109 |
Runs | 9 |
Runs residual | 0.00527605049934 |
Runs probability | 0.0757914777524 |
Amino acid sequence | MGTNSTRISCLQRSFSCPPLPVELSILPLCHPLTCAHIFLYCSYVFTSLLFLYRLLPKGD I |
Secondary structure | LLLLLLEEEELLLLLLLLLLLEEEEELLLLLLLHHHHHEEEHHHHHHHHHHHHHHLLLLL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL L |
PiMo | ooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiii i |