NONHSAT125029
Revision as of 09:04, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125029 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
807 nt |
Genomic location |
chr8-:10880370..10881816 |
Exon number |
2 |
Exons |
10880370..10880644,10881285..10881816 |
Genome context |
|
Sequence |
000001 CAATAACCCA AAGTCATGAA ATGAGAAAGG AAGTAAACAC TTGGATGGAG AATcacacac acacacacac acacacacac 000080
000081 acacacacac acacacacac acCTCCTAAC AGGTATGTTG TCTGCAACAA GGCAAAAATA ATTCATTAAT ATCTCATTTA 000160 000161 AACTTGAGGG CGAGGGAATT CCTGAACCAC CTCTCTGGAG CAAATAATGG AAATTGGAAA TTGATTGTCA TTTACCTTTG 000240 000241 AGGAAGACTT CGGGATGTGC CATGTCTTTG GTATAGGGCT GCGTGGTGTT GTGACGCATG TGAAGAAATA CATCCAAGGA 000320 000321 CCTTCCTAAG CTCATCTGCA GCCACAATTC CCCCACCCTA TTCTTCTCGT AGGGTTTTAA GTTTGCTGTC TGCAAATGTT 000400 000401 CCTCATTCCG GAGTCTTTGG GAACCAATCC ACCTAGCTGG AGAAGGACAT CGTACCCTGG TAATGAAGAC AGGCATAGAG 000480 000481 AGGCACAGGG TTCAGGAGGG GACAGTCAGC ACCGCAGGTG GCTCCGCAGC AGCTGACTCA GTGATTGAGA CGAGTTCCTG 000560 000561 TCTCTGGTTT TGTTCGGCAC ATCAGAGTCT GCGACTGAGC CTTTGGTCTG GAGTTTGAGC AAACTGGAGC TGAAATTGCC 000640 000641 TCGACAGATA CCTTGGAGCG CTGACACCGC AGCACCAGCC CTGCTGTGGC CAGGAAGGGA GGGAGGGGAC TGCCTTTCCT 000720 000721 GTGTGTCTGT GGGTCACGGC CTTGAGTTAG AGCCCCGGGC CTCCTGCCCT GGGACGTGGA GGACCTTACA CAGGTGCCTG 000800 000801 AGGAACT |
Predicted Small Protein
Name | NONHSAT125029_smProtein_395:535 |
Length | 47 |
Molecular weight | 5310.7115 |
Aromaticity | 0.0869565217391 |
Instability index | 96.35 |
Isoelectric point | 10.5287475586 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.0302571479043 |
Amino acid sequence | MFLIPESLGTNPPSWRRTSYPGNEDRHREAQGSGGDSQHRRWLRSS |
Secondary structure | LEEEELLLLLLLLLLLLLLLLLLLLHHHHHLLLLLLLLLLEEEELL |
PRMN | - |
PiMo | - |