NONHSAT030536
Revision as of 09:05, 13 October 2014 by 73.162.128.239 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT030536 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
345 nt |
Genomic location |
chr12-:108571891..108576038 |
Exon number |
2 |
Exons |
108571891..108572124,108575928..108576038 |
Genome context |
|
Sequence |
000001 GCAATTACAG AACAGCAAGG TCAGCTGCCG GGAGCAAGAA TCTCCCTTTT Ggcagagaaa aacagatgga tggaaacaca 000080
000081 acgatataca gaaagatgtt acctcttgga gGGGGGGTGT TTTTCAGATG CTGGTCACCA TAGATGCTGG TCACCACCAT 000160 000161 GCCCTTTCAT AAgtgtcctt acaaaaggag gaaatcagga cagatacatc cagagggaag acgctatgaa gacacagaga 000240 000241 agagggccat ctatgccaag gagaggggta ggaagcaaat tcttcccaca cacacctcgg aggaaccaac cctgctgaca 000320 000321 ccttaatttt ggacttccag cttcc |
Predicted Small Protein
Name | NONHSAT030536_smProtein_143:325 |
Length | 61 |
Molecular weight | 7109.142 |
Aromaticity | 0.0666666666667 |
Instability index | 85.4316666667 |
Isoelectric point | 9.91351318359 |
Runs | 7 |
Runs residual | 0.0330673758865 |
Runs probability | 0.0173618997148 |
Amino acid sequence | MLVTTMPFHKCPYKRRKSGQIHPEGRRYEDTEKRAIYAKERGRKQILPTHTSEEPTLLTP |
Secondary structure | LEEEELLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |