NONHSAT104004
Revision as of 09:17, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104004 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
642 nt |
Genomic location |
chr5-:137451096..137464332 |
Exon number |
3 |
Exons |
137451096..137451453,137454507..137454625,137464168..137464332 |
Genome context |
|
Sequence |
000001 GCATGCATAT AAAGTAAGGA ATAGACGTTA GATTGGATGG ACGTCATCTC TAACTTGTTT TTAGTCTGAG GGCAATTTAT 000080
000081 GGCACAGATG ACCTAAGGAA TGCACTTCAT GGGAGTAATG ACTTTGCTGC TGCGGAAAGA GAAATACGTT TTATGTTTCC 000160 000161 TGAAGTGATT GTTGAGCCCA TTCCAATTGG ACAAGCTGCT AAGGACTATT TAAATTTACA TATAATGCCA ACTCTGCTTG 000240 000241 AAGGACTCAC AGAGCTTTGT AAGCAAAAAC CAGCAGATCC TTTGATTTGG CTAGCTGATT GGCTGCTGAA AAATAATCCT 000320 000321 AACAAACCCA AACTTTGTCA CCATCCAATT GTAGAAGAAC CTTATTAAAA AAAAAATCCT CGAAAGAACA AATCATGAAC 000400 000401 TATCTTATTA TAAAAGGCTG TACTTCTACT GTTTGAAAAA ATTATTTCTA GGGTTTAAGT AACTACAAGT AAAATAAATT 000480 000481 TATTTCTTAA AAATAAGTGT TAAAGGAATA ACTATTCTAT GAAGCAGATA ACATTAAGGT AAAATATAGG CTTAGAGTAT 000560 000561 GATTTTAACA ATGATGTAAC ACTAGGTAAT GGAAAACTCA TGTAAGATGT TGCTAGATGT TTTTGTTTTT CTTAAGTTTG 000640 000641 AG |
Predicted Small Protein
Name | NONHSAT104004_smProtein_152:367 |
Length | 72 |
Molecular weight | 8138.546 |
Aromaticity | 0.0704225352113 |
Instability index | 47.0563380282 |
Isoelectric point | 5.43560791016 |
Runs | 9 |
Runs residual | 0.0217939214233 |
Runs probability | 0.0385974209504 |
Amino acid sequence | MFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPK LCHHPIVEEPY |
Secondary structure | LLLEEEEELLLLHHHHHHHHHHLLLHHHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLLL LLLLLLLLLLL |
PRMN | - |
PiMo | - |