NONHSAT125736

From LncRNAWiki
Revision as of 09:22, 13 October 2014 by 73.162.128.239 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT125736

Source

NONCODE4.0

Same with

,

Classification

sense

Length

495 nt

Genomic location

chr8-:28314175..28331303

Exon number

3

Exons

28314175..28314447,28321129..28321335,28331289..28331303

Genome context

Sequence
000001 CTGCTTGGCA AATGGTTTGA CAAATGGACA GACTCTCAAA GAAGAAGAAT CCTCACAGGC CTGTTGGAGC GCTGCTCGCT 000080
000081 GTCCCAGCAA AAGTTCTGCT GTCGAAAGCT TCAAGAGAAA ATTCCAGCAG AAGCCCTGGA CTTTACAACC AAGCTTCCAA 000160
000161 GGGTGTTATC TTTATACATC TTTTCTTTCC TGGACCCTCG GAGCCTTTGT CGTTGTGCAC AGGTGTGCTG GCATTGGAAG 000240
000241 AACCTTGCTG AGCTGGACCA GCTCTGGATG CTGAAATGTT TACGGTTTAA CTGGTACATC AATTTCTCTC CAACTCCCTT 000320
000321 TGAGCAGGGG ATCTGGAAGA AGCACTATAT TCAAATGGTG AAAGAACTTC ATATTACCAA GCCTAAGGTG AATTTTAGAC 000400
000401 AGAAAGCCAC AAGCTTGCAA ACATTGGCTC TTTGCAAATT CTAGAACTAA GAATAAAGGA TCAGACTGGA AGTTGGGGAA 000480
000481 GGGAGGTAGT TCAAA
[back to top]

Predicted Small Protein

Name NONHSAT125736_smProtein_23:250
Length 76
Molecular weight 8070.3762
Aromaticity 0.0533333333333
Instability index 53.6786666667
Isoelectric point 9.69488525391
Runs 9
Runs residual 0.0289361702128
Runs probability 0.0428271408664
Amino acid sequence MDRLSKKKNPHRPVGALLAVPAKVLLSKASRENSSRSPGLYNQASKGVIFIHLFFPGPSE
PLSLCTGVLALEEPC
Secondary structure LLLLLLLLLLLLLLLHHHHLLHHHHHLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLL
LLLLLLLLEEELLLL
PRMN -
PiMo -