NONHSAT083127

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT083127

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

617 nt

Genomic location

chr22+:17052917..17055527

Exon number

5

Exons

17052917..17053040,17053598..17053643,17053934..17054102,17054312..17054417,17055356..17055527

Genome context

Sequence
000001 GAGTAACAGA CTAGCTAGAG ACAATGAATT AAGGGAAAAT GACAAAGAAC AGCTCAAAGC AATTTCTACA CGAGATCCTC 000080
000081 TCTCTGAAAT CACTGCGCAG GAGAAAGATT TTCTATGGAC CACACTATAT TCTGTCTGTT AAATGGAATT CTAGAGATGA 000160
000161 AGTAGCCCAG CACAGATGTA TTGCTTGGTA AAAGATTGGC CTCCAATCAA ACCTGAACAG GCTATGGAAC TTCTGGACTG 000240
000241 TAATTACCCA GATCCTATGG TTCGAAGTTT TGCTGTTCAG TGCTTGGAAA AATATTTAAC AGATAACAAA CTTTCTCAGT 000320
000321 ATTTAATTCA GCTAGTACAA GGTCCTAAAA TATGAACAAT ATTTGGATAA CTTGCTTGTG AGATTTTTAC TGAAGAAAGC 000400
000401 ATTGACTAAT CAAAGGATTG GGCACTTTTT CTTTTGGCAT TTAAATCTGA GATGCACAAT AAAACACTTA GCCAGAGGTT 000480
000481 TGGCCTGCTT TTGGAGTCCT ATTGTCGTGC ATGTGGGATG TATTTGAAGC ACCTGAATAG GCAAGTCGAG GCAATGGAAA 000560
000561 AGCTCATTAA CTTAACTGAC ATTGTCAAAC AGGAGAAGAA GGATGAAACA CAAAAGT
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Predicted Small Protein

Name NONHSAT083127_smProtein_38:190
Length 51
Molecular weight 6073.0253
Aromaticity 0.12
Instability index 70.5742
Isoelectric point 10.3754272461
Runs 10
Runs residual 0.0353216374269
Runs probability 0.0371135841724
Amino acid sequence MTKNSSKQFLHEILSLKSLRRRKIFYGPHYILSVKWNSRDEVAQHRCIAW
Secondary structure LLLLHHHHHHHHHHLHHHHHHHHHEELLEEEEEEEELLHHHHHHHHHHLL
PRMN -
PiMo -