NONHSAT139913

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT139913

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1467 nt

Genomic location

chr1+:169455380..169456846

Exon number

1

Exons

169455380..169456846

Genome context

Sequence
000001 GGACATGTGG AACTCCACTC CAAAAGCGGC GGCTTGCGGC GGAGCTCTCT CTAGTGAGGC GGCCAGCTGG CGTTCGTGGC 000080
000081 ACACTTGCTG TCGGCTCCGC TCATCTGTTG GGAATGCGTC CTGTGGGCCT AGTCCTCCGC TGGAAGAAAC GCGCTGTTCT 000160
000161 CCCCAACCAC CGTTTATCAT TCTTATTCAC CGTCTCCGGA ATGTCCATTC AGTTTCCGCT CCTGAGAGAC TTAGTGACTG 000240
000241 AGGCCAGGCA AAGATTTCAC CTTGGGGAGG GGGAACGTTA AACCTTTCCT CCAGCAGCTT TCGTGTTTTA AATTGTATTC 000320
000321 ATCCGCCATG GAAAGACATC AGAAGCCCAG GATCTAAGAG ACAGACTGAA ATGAAGAAAG TAGATAATAT TGTGAGAATA 000400
000401 ATGAACAAGC TGGTCACTGA ACAGCAGAAC CGTAATGGAG TCCCAGTTAA AGGGTTTTAA CTTTATTTCG TCACTTTTTG 000480
000481 CAAGCATGAT ACAAAGAAAA CAAACACCTA ACTACGCTAC GGTTTATAGT TAAAAGGAAG GTGGAAGATC CTGAGTCATT 000560
000561 ACAGCAATCA CAAAACATGA TGGATTTCTT CATTTAAAAA CACAAAAGAG GTCTTGGCAT AGTTTTCAAG GGCAAAGCAT 000640
000641 GACAAGACTC TCCAGTGCTT TCTTTCATCC CCCTCTGTGT GCCTTTTTCT GCCTGACTCA CAGCCTGGCT CAATCCTAAT 000720
000721 CTTTCTACTG CAAAGATGCA GCATTTAAAG CAATTTTTCC TGTGCAGTAT TTGTAGAATG ACAGATCCTG CCAGAAGCTC 000800
000801 TTGGAAACAT TTTGGAACTA TCTTGCTTTT CTGTATGTTA TGATCCATCT AGCACCGTTT TCCTCCTGTG GTAGCAAATG 000880
000881 ACACTTTTTT CAAGCATCAG CAGCAGAAAT GAGTCTACCA GATGGAATAA GATACTGGTA AAGGGAAAGA TTTGTTTCTA 000960
000961 AGACTGCACA AATGAATGCA CCCAAATCTG TGAGTTGATT AATCTGTGAA GAAATACAAC TGGCAGTATT TACATATCTc 001040
001041 aatgagtctc aaagtgtggt cgaggaagcc ctgggggtcc ttgggaccct ttcagaggtt ccacgagctc aaatctattt 001120
001121 tcataaccat gctaagtctt tatttccttt tccactccag aggctatata atgtctgatg acatcatcgc tttataggat 001200
001201 gagagaatac gtgcttgtat attcttgtgt ttgtaagact ttccaggttt aatttattac catatggcaa ttttcaataa 001280
001281 gtataaccca caaaacccaa cagatttttg gggcacctct aacaagggtc ctaagaccaa aatgtttgag gactgctAAT 001360
001361 CGATATTATT CAATTGTCTA GTCCCCTAAA CTCCAACCCT TCTTATCAGG ACTACAGAGA GAAAACAGGT GGTCTTCTTG 001440
001441 ACAATCGCTT TGTATTTACA TTCAGTG
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Predicted Small Protein

Name NONHSAT139913_smProtein_113:280
Length 56
Molecular weight 6460.5889
Aromaticity 0.0909090909091
Instability index 53.5927272727
Isoelectric point 11.7855834961
Runs 11
Runs residual 0.0484848484848
Runs probability 0.0403076873665
Amino acid sequence MRPVGLVLRWKKRAVLPNHRLSFLFTVSGMSIQFPLLRDLVTEARQRFHLGEGER
Secondary structure LLLEEEEEEEELEEELLLLLEEEEEEELLLEEELHHHHHHHHHHHHHHHLLLLLL
PRMN -
PiMo -