NONHSAT007466

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT007466

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1058 nt

Genomic location

chr1+:169458428..169459485

Exon number

1

Exons

169458428..169459485

Genome context

Sequence
000001 gtgctgctat gaacatttgt atgcaagtgt gtatttgaat atttattttt atttctttgg ggtatatacc taggagtaga 000080
000081 attgttgtgt catttggtaa ttctgtgttt atctaagaaa ctgccaaact gttttccaca ggctgcatga tttcacattc 000160
000161 tcataagtaa tgtacaaagg ttccaatttg tccacatcct tgccaacact tattttcctt tttatagtag ccatcctggt 000240
000241 gggtgtgaag tggtatctca ttgtggtttt gatgtacttc tctaatgact gatgttgagc atcttctcat gtatttgttg 000320
000321 gccaatcata taacttcttt ggagaaatgc ctattcaagt cctttgcccc tctttgattc agttgtttgt ctttttgttg 000400
000401 ttgagttaga agagttcttt ataaattcta ggtactagac ctttgtcaga tatgatttgc aaatatattt tcttccattc 000480
000481 agtaggGGTA AATAGAATAT TGAGAGACTT TTTATATAGT AATATAAAAA AGCATGAAGG GATGTGTTTT GCAAAAAGTA 000560
000561 AGATTACACA GTATTATACA ACTATGTtat acactttggc tcttggtttt ctctctaagg aataactcat gaagaacatt 000640
000641 ccatgtgtta aggtatacct ctaattcttt ctaatgccta cataatatcc tattgcatgg gtgtgctatt caccccctac 000720
000721 ttatggttat tcattctgtt tctagttttt ggccactgcc aacaatgctg cagttaacat ccttgtacaa tatatgttta 000800
000801 tgtattttaa atttcagttt aaaaggattt attctgagga gtagtatttc tggtttaaag agtatatgtg tttttaattt 000880
000881 taatagatat tgctcaattg ttttacatta ataacttaca tttttactag caatatatga aaacattctt tctgcactgc 000960
000961 atccttgatt acagttataa tcaaacttta caatttttgc ttatctaata ggtataaatc agtggttctc aatcggtaat 001040
001041 gattttgtcc cacagggg
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Predicted Small Protein

Name NONHSAT007466_smProtein_722:910
Length 63
Molecular weight 7070.4554
Aromaticity 0.129032258065
Instability index 40.2483870968
Isoelectric point 9.20135498047
Runs 11
Runs residual 0.0237788018433
Runs probability 0.0430136018372
Amino acid sequence MVIHSVSSFWPLPTMLQLTSLYNICLCILNFSLKGFILRSSISGLKSICVFNFNRYCSIV
LH
Secondary structure LEEEEELLLLLLHHHHHHHHHHHHHHHHHHHLLLLEEEEEELLLLLEEEEEELLLEEEEE
EL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL
LL
PiMo oooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiii
ii