NONHSAT007466
Revision as of 09:27, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007466 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1058 nt |
Genomic location |
chr1+:169458428..169459485 |
Exon number |
1 |
Exons |
169458428..169459485 |
Genome context |
|
Sequence |
000001 gtgctgctat gaacatttgt atgcaagtgt gtatttgaat atttattttt atttctttgg ggtatatacc taggagtaga 000080
000081 attgttgtgt catttggtaa ttctgtgttt atctaagaaa ctgccaaact gttttccaca ggctgcatga tttcacattc 000160 000161 tcataagtaa tgtacaaagg ttccaatttg tccacatcct tgccaacact tattttcctt tttatagtag ccatcctggt 000240 000241 gggtgtgaag tggtatctca ttgtggtttt gatgtacttc tctaatgact gatgttgagc atcttctcat gtatttgttg 000320 000321 gccaatcata taacttcttt ggagaaatgc ctattcaagt cctttgcccc tctttgattc agttgtttgt ctttttgttg 000400 000401 ttgagttaga agagttcttt ataaattcta ggtactagac ctttgtcaga tatgatttgc aaatatattt tcttccattc 000480 000481 agtaggGGTA AATAGAATAT TGAGAGACTT TTTATATAGT AATATAAAAA AGCATGAAGG GATGTGTTTT GCAAAAAGTA 000560 000561 AGATTACACA GTATTATACA ACTATGTtat acactttggc tcttggtttt ctctctaagg aataactcat gaagaacatt 000640 000641 ccatgtgtta aggtatacct ctaattcttt ctaatgccta cataatatcc tattgcatgg gtgtgctatt caccccctac 000720 000721 ttatggttat tcattctgtt tctagttttt ggccactgcc aacaatgctg cagttaacat ccttgtacaa tatatgttta 000800 000801 tgtattttaa atttcagttt aaaaggattt attctgagga gtagtatttc tggtttaaag agtatatgtg tttttaattt 000880 000881 taatagatat tgctcaattg ttttacatta ataacttaca tttttactag caatatatga aaacattctt tctgcactgc 000960 000961 atccttgatt acagttataa tcaaacttta caatttttgc ttatctaata ggtataaatc agtggttctc aatcggtaat 001040 001041 gattttgtcc cacagggg |
Predicted Small Protein
Name | NONHSAT007466_smProtein_722:910 |
Length | 63 |
Molecular weight | 7070.4554 |
Aromaticity | 0.129032258065 |
Instability index | 40.2483870968 |
Isoelectric point | 9.20135498047 |
Runs | 11 |
Runs residual | 0.0237788018433 |
Runs probability | 0.0430136018372 |
Amino acid sequence | MVIHSVSSFWPLPTMLQLTSLYNICLCILNFSLKGFILRSSISGLKSICVFNFNRYCSIV LH |
Secondary structure | LEEEEELLLLLLHHHHHHHHHHHHHHHHHHHLLLLEEEEEELLLLLEEEEEELLLEEEEE EL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL LL |
PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiii ii |