NONHSAT126557
Revision as of 09:39, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126557 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
572 nt |
Genomic location |
chr8-:53130332..53161972 |
Exon number |
6 |
Exons |
53130332..53130461,53133301..53133408,53134200..53134353,53142592..53142637,53159146..53159224,53161918..53161972 |
Genome context |
|
Sequence |
000001 ATCACTGCTT CCCTGATGTC AGCGTGAGAG GCAGAACAAA GGCTAGGAGG CACCGAGCCC CCAATTTTGT GAGTGTCCCT 000080
000081 GAAGCATTGT GACAATTCCA TTTTATGTGT CTGCGTGCTC ATATCAAGAC TAAGGAGTGA TGGAAACTCT CCAGTTCAGA 000160 000161 TCCAGTAGCT TTTAGGGAAG GAACTACAGT TGCTGACTTA AGTTGAAGAA GCATCTATTT AATGTCTGGT CAAATCCTAC 000240 000241 AAGAAACACA GAAATCTATG ATTAAAAAGC TGAGCACTTT GATATACTGC AAAGGGTAGA GAAGGCAGGA CGGTAGAAAT 000320 000321 TTTCTGCAAG AAAGAATGAA TTTCAGGATT TATCACTAAA TAAGACAAAG TCATTTATTT AGTCCCCCTG ACACAGCAGG 000400 000401 GCAAACTGAG TTGACATACA AGTTACCTGG AGAAAAAGAG AGCAATTCCA GGACTTCCTC TTCAGCCTAA AAGAAGGTAC 000480 000481 CAGATCTGTG CACTGGGGCG ATGTGGAAGA GACCTGCTTA TTGCCCCTGA TGTAAGCTCC AGTAAGAAAA GACGTCAAGT 000560 000561 ACAAGTACTA GG |
Predicted Small Protein
Name | NONHSAT126557_smProtein_221:298 |
Length | 26 |
Molecular weight | 2829.4021 |
Aromaticity | 0.04 |
Instability index | 42.42 |
Isoelectric point | 9.51654052734 |
Runs | 4 |
Runs residual | 0.0483018867925 |
Runs probability | 0.00728669846315 |
Amino acid sequence | MSGQILQETQKSMIKKLSTLIYCKG |
Secondary structure | LLHHHHHHHHHHHHHHHHHEEEELL |
PRMN | - |
PiMo | - |