NONHSAT060677
Revision as of 09:47, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060677 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
821 nt |
Genomic location |
chr19+:5181326..5182146 |
Exon number |
1 |
Exons |
5181326..5182146 |
Genome context |
|
Sequence |
000001 caaaaaaaaa aaaaaaaaaa aaaaaaagaa agacagggtg tcactgtgtc acccaggctg tagtgcagtg gtgtgatcat 000080
000081 agctcactgt agcattcaac tcctggggtc aagcaatcct cccacctcag tatcctgagt agctgggact acaggcatgc 000160 000161 accaccgtgc cttgctgatt tttttaatag agagggggtt ttgctatgtt gcgcaatctg atcccaaatt cctggcctca 000240 000241 attgatcctc ctgcctcagc ctcccaaagt gctagcatta caggtgcata ccaccacact aggcttattt taaaatttgt 000320 000321 ctgtagagat ggggttttgc tatgttgccc agtctgatcc cagattccta gcctcaagtg atcctcctgc ctcagcttcc 000400 000401 caaagtgcta ggattacagg tgtgcaccac cacactaggc taatttttaa atttgtctgt agagatgggg ttttgctatg 000480 000481 ttgcccaggc tggcctccaa ctactggccc caagtaatcc tcctgcctca gcctcccaag gcactgggat tacaggcgtg 000560 000561 agccaccatg ctcggctatc acacataaat tcttgtaact aaccacagat gagatacaga actattcggt ccccacaaag 000640 000641 atctctctaa agctactccc tgggagtgac ccccacccca ttcctaaccc taggcaaccc ctaatctctt ctccagtcta 000720 000721 caactttatt atttcaagaa tattatagga cgggtgtggt ggctcacacc cataatccca gcactttggg aggctgaggc 000800 000801 gggtggatca cttgagcccc g |
Predicted Small Protein
Name | NONHSAT060677_smProtein_464:601 |
Length | 46 |
Molecular weight | 4565.0918 |
Aromaticity | 0.0444444444444 |
Instability index | 47.2444444444 |
Isoelectric point | 7.88812255859 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0452973982387 |
Amino acid sequence | MGFCYVAQAGLQLLAPSNPPASASQGTGITGVSHHARLSHINSCN |
Secondary structure | LLLHHHHHHHHHHHLLLLLLLLLLLLLLEEEEELLLLEEEELLLL |
PRMN | - |
PiMo | - |