NONHSAT127069
Revision as of 09:51, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127069 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
610 nt |
Genomic location |
chr8-:67925133..67968839 |
Exon number |
4 |
Exons |
67925133..67925331,67929854..67930066,67963465..67963576,67968754..67968839 |
Genome context |
|
Sequence |
000001 GGCTACAAAC CTCCTGATGA AGGACCTTCT GAGTACCAGA CTATTCCACT TAATAAAATA GAAGATTTTG GTGTACACTG 000080
000081 CAAACAATAT TATGCCTTAG AAGTCTCATA TTTCAAATCC TCTTTGGATC GCAAATTGCT TGAGCTGTTG TGGAATAAAT 000160 000161 ACTGGGTGAA TACGTTGAGT TCTTCTAGCT TGCTTACTAA AGTTGGAAAT AATACCTAAA CCTACTTCTT GACATGGTGT 000240 000241 CAAAACAGAG CTTTTGCTGA GAGTTTGATT TATAAAGAAA TTATGGTTCG ACTGACCTTG GATCTAATTG CCAGAAACAG 000320 000321 CAATCTTAAA CCCCGAAAAG AAGAAACCAT TTCACAGTGC CTGAAGAAAA TAACTCATAT AAATTTTTCA GACAAAAATA 000400 000401 TAGATGCAAT TGTATCTGGG AGGCAATTAC ATTGCTGTCA TAGAAGGTTT AGAAGGATTA GGAGAACTAA GAGAGCTTCA 000480 000481 TGTTGAGAAT CAGAGGCTTC CCCTTGGGGA AAAGCTTCTG TTTGATCCAA GAACTCTTCA TTCTCTGGCA GTAAGTTCAC 000560 000561 ATTTGAATAT TTTGACAAGG AATATAGTGA TTAACAAGTT ATAATGAAAC |
Predicted Small Protein
Name | NONHSAT127069_smProtein_479:553 |
Length | 25 |
Molecular weight | 2909.5575 |
Aromaticity | 0.166666666667 |
Instability index | 52.5 |
Isoelectric point | 9.49639892578 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0380321497969 |
Amino acid sequence | MLRIRGFPLGKSFCLIQELFILWQ |
Secondary structure | LLEEELLLLLHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |