NONHSAT105437

From LncRNAWiki
Revision as of 09:53, 13 October 2014 by 73.162.128.239 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT105437

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

489 nt

Genomic location

chr5-:176990793..177000002

Exon number

3

Exons

176990793..176991170,176991552..176991645,176999986..177000002

Genome context

Sequence
000001 TTgggaggct gaggtgggtg gatcacgagg tcaggagatc gagaccagcc tggtaacaca gtgaaacccc gtctactgaa 000080
000081 aatacaaaaa attagccggg catggtggca cATGCCTATT CCTCACTCTT TCCAGGTGGT AGGGCCCCAC AGGCCTGCTA 000160
000161 CTTCTGCATC ATGGGGAGAG AATGAGTCCT CTGATCAGTG CGTCTGGAGA ATCGGGTGCA TGATCTGCTC TGTTCTGCCC 000240
000241 TTCTTCCTCT TGGGATCTCC CTGCCTACAA TGGGTCCACA CCCActgccc ctacagggat tctgagaggg aggcctaccc 000320
000321 agcccagtac tgccacaact caggggctgc ggggggtgtc tgcctaactt gggggctcag tcatcagccc acaccaagca 000400
000401 acatactctg acctggggca tgacttagtt ggtaataagg ctgatattgt gactccatct gcctttcctt tgcttcattt 000480
000481 cccagtgtg
[back to top]

Predicted Small Protein

Name NONHSAT105437_smProtein_101:184
Length 28
Molecular weight 2963.4377
Aromaticity 0.148148148148
Instability index 55.862962963
Isoelectric point 7.83636474609
Runs 6
Runs residual 0.0155662909286
Runs probability 0.0290879114409
Amino acid sequence MVAHAYSSLFPGGRAPQACYFCIMGRE
Secondary structure LEEEELLLLLLLLLLLHHHEEEELLLL
PRMN -
PiMo -