NONHSAT033251
Revision as of 09:57, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033251 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1159 nt |
Genomic location |
chr13-:38136834..38139140 |
Exon number |
2 |
Exons |
38136834..38137507,38138656..38139140 |
Genome context |
|
Sequence |
000001 ATTTTACAGA GGCAGACATT GCACATAGGT ATGACTGCAA AAATGGGTGG CTAACTCTGG GAAGATACTT GTGTTAAACT 000080
000081 TTATATGACA TTTAATAACC CTTCATCATA AGGCAATGTT TTTTACAAAA AGATTGAAAA AATCATGTAA GTCATTTACT 000160 000161 CTGCAAAAAT GGCACATTAG GTGGGGTTCC AAAATCCATA ATGAAACAAT GTGTTTTGCA ACTAAGAAAC ATTCATTATG 000240 000241 ATATATGGAA AACACTGTCT GTCTACTTGT CCTTTACGAA AAAATGTAAA ACTCTGAGGA TCATAAAATT TAACTACTAA 000320 000321 AAATAATCTT CGTGTTTAAG TGATACTTAT TTAAGACTTT ACACTGTTCT GTTTAACCAT GGTCTCCTGT CTGATTTTAG 000400 000401 CCATAATTGC GAAGTATTTC TAACTACAAC AATTTAATTT TAGACACACC CGTGAGGAAG TTGCAAGCCA ACAAAAAAGT 000480 000481 TCAAGGATCT AGAAGACGAT TAAGGGAAGG TCGTTCTCAG TGAAAATCCA AAAACCAGAA AAAAATGTTT ATACAACCCT 000560 000561 AAGTCAATAA CCTGACCTTA GAAAATTGTG AGAGCCAAGT TGACTTCAGG AACTGAAACA TCAGCACAAA GAAGCAATCA 000640 000641 TCAAATAATT CTGAACACAA ATTTAATATT TTTTTTTCTG AATGAGAAAC ATGAGGGAAA TTGTGGAGTT AGCCTCCTGT 000720 000721 GGTAAAGGAA TTGAAGAAAA TATAACACCT TACACCCTTT TTCATCTTGA CATTAAAAGT TCTGGCTAAC TTTGGAATCC 000800 000801 ATTAGAGAAA AATCCTTGTC ACCAGATTCA TTACAATTCA AATCGAAGAG TTGTGAACTG TTATCCCATT GAAAAGACCG 000880 000881 AGCCTTGTAT GTATGTTATG GATACATAAA ATGCACGCAA GCCATTATCT CTCCATGGGA AGCTAAGTTA TAAAAATAGG 000960 000961 TGCTTGGTGT ACAAAACTTT TTATATCAAA AGGCTTTGCA CATTTCTATA TGAGTGGGTT TACTGGTAAA TTATGTTATT 001040 001041 TTTTACAACT AATTTTGTAC TCTCAGAATG TTTGTCATAT GCTTCTTGCA ATGCATATTT TTTAATCTCA AACGTTTCAA 001120 001121 TAAAACCATT TTTCAGATAT AAAGAGAATT ACTTCAAAT |
Predicted Small Protein
Name | NONHSAT033251_smProtein_200:319 |
Length | 40 |
Molecular weight | 4837.8164 |
Aromaticity | 0.153846153846 |
Instability index | 60.9974358974 |
Isoelectric point | 9.94000244141 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0319878702231 |
Amino acid sequence | MKQCVLQLRNIHYDIWKTLSVYLSFTKKCKTLRIIKFNY |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHEEELLLLEEEEEEELL |
PRMN | - |
PiMo | - |