NONHSAT127382
Revision as of 09:58, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127382 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
505 nt |
Genomic location |
chr8+:80432380..80432884 |
Exon number |
1 |
Exons |
80432380..80432884 |
Genome context |
|
Sequence |
000001 gaaactgtat ttatgaaaaa gaatacaaaa ttccaattac aaaattGAAC ATGCATTAAA TATCTCCATG GAGAAACTGC 000080
000081 AGCAGCAACA GTACAAGTGA GGGTATGCTA TATTCAATTA GCCATGAACA TTTGAGAGCA ACTTTATCCA GATCAACGAA 000160 000161 AGAGAAGTGA TAGGTGTGCA CAACTATGTC AAATGGTGAC TGTGGGCATT GCATGCACCT GCCACCTCAA ACTACCTGAG 000240 000241 GTCATGCTGC TGGCCCCACC AGCTGCAAGC TAGAAAAAGC GTGTGCCAAA GTGGCTGTGC CAGCCAGGGA AGAGGGGCCA 000320 000321 CAAGAACTTA GAGCTAACCA GACTGACTGT CTGACATTTT GTAGAGATAT CTTCAGGACC ATGAGAAACA GCTCCACCTG 000400 000401 AAGCTTACCT GAAACCGTGT CTCCTTTCAG ATGCAATAAA TCTTTTCATT TGTTGGAAAA ATGTTTGTTT CCTCCTGATA 000480 000481 GCAGCAGTGG AAGGTTACAC CAGTA |
Predicted Small Protein
Name | NONHSAT127382_smProtein_104:169 |
Length | 22 |
Molecular weight | 2487.8324 |
Aromaticity | 0.047619047619 |
Instability index | 45.2 |
Isoelectric point | 9.69415283203 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0100865571454 |
Amino acid sequence | MLYSISHEHLRATLSRSTKEK |
Secondary structure | LLEELLHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |