NONHSAT106359

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT106359

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2020 nt

Genomic location

chr6-:1062458..1064477

Exon number

1

Exons

1062458..1064477

Genome context

Sequence
000001 GCGCACCAAC AGTGTTATCG GCAGGCTGCC TGACTTGGAA AAGGAGGAAG GTCGTTCCTA CACATTTTCG TTCCTTGTTG 000080
000081 GTTTTCACTA CAAAGGACCT CACACACCCC CATAGTGCCC GTGGGCTGGC GTGTCCCCAG GATAAATAAA ACCTGCATTT 000160
000161 TTCTTATTAA TCATCAATAT GAAAACACAT GACCTCTCTT TCTATTGTTC TGTGCCTGGT TCACGCCCTG TATAATTTTA 000240
000241 TATGGTTCCT ACAGCCCTGA CATGCCCTGA GCAACAATCG ACATTGATTC ACTGACTTAT AAAAGTGTAT TATCTGTTCT 000320
000321 CTGTGTCTAC GTAGAGTTCT CTGAGAGTTG CCCAGGCAGT GACTCAGGAC TCCAGAGAGA GGTGCACAGA GCGGTCACAC 000400
000401 ACCAGGGAGG GAGCGATTTG CAACTCAGAA TACTTCTTAG CAGAAAGCAC ATTTGGGCTT GATCTGCTCC TTGATTTCTG 000480
000481 TGGGAGTGAC TTCGTGACAG TTTCAAGCTG AATCCTACAT TTGCTTCTTA AGTCAACTGA AATTCCATTC GAGTTAGATC 000560
000561 CATTCTGTGT CCACTTTAAA AGCCAAGCTG TTTAGTGGGG GATTGTTATG ACACAGCAAG CTTGACAAAA AATACACCTG 000640
000641 GTCTTAGAAG CAATCTTTGC ATAGCTCTGA ATGCACAGAA GAAAATCGTG CTTGGGTAAA GGCAAGGATT TCACTAGGCA 000720
000721 TAACTCACCA TGAGGCATAG ATCCTTGAGC AAAAGTCCAG CAGTATGTAT GTATGCATGC TGAGCATGAT GCTACCAGCT 000800
000801 TAGCAGCAAA TGTTGGTGAA GGAAAATAAA ACAATGCATG TGTCCAACAT TAAAAGTTTC TAAGTTTAAA AGTACAACAA 000880
000881 AATTCTGCTA AATTTCTAAC GGACGCTAAT GTTTACAACT TCTCTTTGAG TCAGAAGGTT TTAGTTATTA CTAAAACATG 000960
000961 CTTCCTCAAT TCCAAGCCTC TTCATTTTAA TGTATTTGTA ACTAGGCAAT TACACAGTCT GGAGAGATCC TTCGTGCTCA 001040
001041 CTAAATATCC ATGCTCTTTC TTCCATTTCC CAGCCTTCTT TGCAGTTTTC CTGGACTCAT GAAATAAGAA CAAAGGCATT 001120
001121 GTGCATCGCC TTCAGGTTGA GGCAGCTAAA AGCTAGTAAG CCTCCTTCAT TTCCCTCTTC CCCTGACAGT GGGGGACCTG 001200
001201 TGCTCTAGAG GGCATCCCCG CATAAGGAGA GTGGCGGCCC GGCCCACATT CAACTGTGAC CTGAGAAAGG AATGAACCGT 001280
001281 GATGATGTGA AAGAATGCTG TGGCCTTTGT GTGTTACCAC AGCATAGCTT GTCCTATCCT GTCTAATACA CACATTTAAG 001360
001361 GTAAAGAGGA TTTTCCCCTG CAAAGCTAAT ATTACATCTA TGACAAATGT TATCATTATT GTCATAGAAT CCAAAAAATA 001440
001441 CAAATTCTAT TTATTTAACT TCAGTGGTAA ATGAGAAACT TTCGAGAAGC AGTAATTGTA TCTAGAGAAG CTATTCTCAG 001520
001521 TTGAAGGTAG GGGCAGCTTC CAGACAATCC CTAGAGAGCA CTCCCAAACC CCTATACCTT CCCCACCCTA ATCCTCTTAC 001600
001601 CCTCCAGATT TGGAGACAAC TTTTTCTTCT ACATACTTTT GATAACCACA AATTAGAGAG AGAGAGAGCA AGATTCCAGG 001680
001681 AGCATCCACC AGTTGAGCCG TGAACAATGC AGGGTTTAGG GGTGGTGACC CCTGCAAGTC AAAACCCCAC ATACAATTTT 001760
001761 TGACTCCCCA AAAACTTGAC TCTAACAGCT ACTGTTGACC AGAAGCCTTA CTGAGAGCGT AAACCATCGA CTAACACGTT 001840
001841 ATGTATGCTG TATGTATTAC ATACTGTATT CTTACAATAA AATAAGCTAG AGAAAAGAAA ATGTTATTAA GAAAATTGTG 001920
001921 TGGAGGAGGA GGAAAAGAAG GAGTTGGCCT TGCTGTCTCA GGGGTACCAG ATATGGAAGA GAATGCGCAT ATAAGTGGAC 002000
002001 CTGCACAGTT TAAACCTGTG
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Predicted Small Protein

Name NONHSAT106359_smProtein_1271:1345
Length 25
Molecular weight 2707.1332
Aromaticity 0.0416666666667
Instability index 52.7666666667
Isoelectric point 5.36175537109
Runs 5
Runs residual 0.0267857142857
Runs probability 0.0468291821233
Amino acid sequence MNRDDVKECCGLCVLPQHSLSYPV
Secondary structure LLHHHHHHHLLLEELLLLLLLLLL
PRMN -
PiMo -