NONHSAT129204
Revision as of 10:39, 13 October 2014 by 73.162.128.239 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT129204 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
471 nt |
Genomic location |
chr8-:134014850..134015320 |
Exon number |
1 |
Exons |
134014850..134015320 |
Genome context |
|
Sequence |
000001 ATGACAAACA CAAAGGGAAA GAGGAGAGGT ACCTGGTATG TTCTCCAAGC CTTTTGGAAA ACATGGAGTT GTTCGTTTGG 000080
000081 CCAGGTACAT GTGAATCTGT AAGAAAGGTG ATATGGTAGG CATCAAGGGA ATGGGCACTG TTCAAAAAGG TATAACCCAC 000160 000161 AGGTGTTACC ATGGCAAAAC TGGAAGCGTT TACAATGTTC CCCAGTGTAC TGCTGGCATT GTTGCAAATG AACAAGGGCA 000240 000241 TGATTCTTGA CAAGAGAATT AATGTGGGTA TTGAGCACAT TAAGCACTCT GGGAGTCAAG ATAGCTTCCT GAAACACGTG 000320 000321 AAGGAAAATG ATCAGAAAAA GAAGCCCAAG AGAAGGGTAC CTGGGCTCAA CTGAAGCGCC AGCTTGCTCC ACGCAGAGAA 000400 000401 GCGCACTGTG TGAGAACCAG TGGGAAAGGC CAGAGCTGCT AGAACCTATT CCCTATGAGT TCATGGCATA G |
Predicted Small Protein
Name | NONHSAT129204_smProtein_170:373 |
Length | 68 |
Molecular weight | 7656.0337 |
Aromaticity | 0.044776119403 |
Instability index | 60.0611940299 |
Isoelectric point | 10.1683959961 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0425077483901 |
Amino acid sequence | MAKLEAFTMFPSVLLALLQMNKGMILDKRINVGIEHIKHSGSQDSFLKHVKENDQKKKPK RRVPGLN |
Secondary structure | LLLHHHHLLLHHHHHHHHHHHLLLLEELLEEEEEEEEELLLLHHHHHHHHHHHHHLLLLL LLLLLLL |
PRMN | - |
PiMo | - |