NONHSAT109005
Revision as of 11:22, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT109005 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
657 nt |
Genomic location |
chr6+:33532609..33533265 |
Exon number |
1 |
Exons |
33532609..33533265 |
Genome context |
|
Sequence |
000001 aggagaatcg cttgaacccg ggaagtggag tttggagtga gccaagattg tgccattgca ctccagccta tgcaacaaga 000080
000081 gcaaactctg tcaaaaacaa aaaCACACAC AACAGATACA CTCAGAGATT GTGCCCTCAA GTCATATACT GCACATGACA 000160 000161 AGTACAAATA CCGGAGCTAA ATCCTAATAC TCTCCCCATT CTATTTGAGT TTGTTTATTG AGGCTTCAag gcactcaata 000240 000241 aatgtttgct gaatgaatga aAGAAAGCCA GAATTCTCAT TTGATTTCAT ATTAGAGGAA TTGGCCCTAA AACTATTTAA 000320 000321 GAGGCAGACT TGAACTTATA CACAGGTCCC ACAACTTAAG CCAtgtcaaa ggacaacatt ataacaaatt tagcttaaag 000400 000401 atctcagttg gcattatttt cgattctaga atcaggcaac acttcattcc gtaaaataga ataaatgttc catgagctca 000480 000481 gcagaagatg ttgccttttt tttttgagat ggagtcttac tctgtcaccc aggccagagt gcagtggcgt gatctcggtt 000560 000561 cactgcaacc tctgtctcct gggttcaagc gaagttcagg cgactctcct gcctcagcct cctaagtagc tggaattata 000640 000641 ggtgtgtgcc accatgt |
Predicted Small Protein
Name | NONHSAT109005_smProtein_464:628 |
Length | 55 |
Molecular weight | 6102.1858 |
Aromaticity | 0.0740740740741 |
Instability index | 88.3592592593 |
Isoelectric point | 8.40838623047 |
Runs | 10 |
Runs residual | 0.0224932249322 |
Runs probability | 0.0483925101572 |
Amino acid sequence | MFHELSRRCCLFFLRWSLTLSPRPECSGVISVHCNLCLLGSSEVQATLLPQPPK |
Secondary structure | LLLLLLHHHHHHHHHHHLLLLLLLLLLEEEEEELLEEELLLLHHHEELLLLLLL |
PRMN | - |
PiMo | - |