NONHSAT036644
Revision as of 11:24, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036644 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
917 nt |
Genomic location |
chr14+:45605717..45607162 |
Exon number |
2 |
Exons |
45605717..45605742,45606272..45607162 |
Genome context |
|
Sequence |
000001 GCAATCCCAC ATGGCCGAAA TGACAGGGTC TACACAAGCT TCCACCAGGA AGGAAATATG GTGCAGTAAG AGAGTGCTTT 000080
000081 TTCTTACACC TCAGGTCATG GTAAATGACC TTTCTAGAGG AGCTTGTCCC GCTGCTGAAA TAAAGTGTTT AGTTATTGAT 000160 000161 GAAGCTCATA AAGCTCTCGG AAACTATGCT TATTGCCAGG TAATAATTTT GTTAAACGGT ATTTTGTATT GTAACTGTAC 000240 000241 TGTTAAAGAG AATTTTGGCG AATAGTTACT AGTGATGGAA GTTATTGACA ATATTATTAT AAAAAGCCTT TACGTCTATT 000320 000321 ATCTCAGAAC AGATGGTGAT AAAGAATATC TGTACTTTCT GTCATCCATT CAAATCAGTG TCTTCACTGC CTTTTGCTGT 000400 000401 TATTGTTGTT TTCTTTTTCT TTTCTTCTAT TTTAAGACTA ACCAGATAAT TAGTGTCAGA TGTAGATCAT GAGAGCCTAG 000480 000481 TCATGGTTGG GACAGTGATC TAAAATAGGG TATGAAAGGA GTTTTGAAAT TAATAAAGAT TGGTAGTGGA TATGCGGTGT 000560 000561 CTCTTCTTGG CGGCTAGGTA AAATAATGAC ATAATGTATG CCACATACCT AACACAGTGC CTTCCAGTTG AGTACTCCAG 000640 000641 GAATATAAAA TAAGATGAAG TAGTGGGATG TGGTTGCAAA CATCATTCAT ATCTTTGCAC TGAATGAAGT TGACTTTCTG 000720 000721 TTTCCCTCTT CTCCTAAGGG GGATTTTGCC TCTTCTACTC AAGGTCCAGG TCATTAATAT TTTATGCTTA ATAGTTTGAA 000800 000801 AGCCTTTGTA GGCCATAGGG GATAAAGGTG GTGGGGACTC ATTAAAAAAT GTTTGGCTGG GATAACACTT AAGATTTGAA 000880 000881 AGAGATTAGA GAGAAGAAGG CTAAAGACAG AGTATCT |
Predicted Small Protein
Name | NONHSAT036644_smProtein_332:448 |
Length | 39 |
Molecular weight | 4396.3324 |
Aromaticity | 0.184210526316 |
Instability index | 68.0026315789 |
Isoelectric point | 10.1056518555 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0743390449273 |
Amino acid sequence | MVIKNICTFCHPFKSVSSLPFAVIVVFFFFSSILRLTR |
Secondary structure | LEEEEEEELLLLLLLLLLLLLEEEEEEEEHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTTTiiii |